wc-1 (Neurospora crassa)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 NCU02356 T196900_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
wc-1
M01236_2.00		 Neurospora crassa
MCGATCGM
KCGATCGK		 PBM
Lambert et al.(2019)
pTH9706		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01236_2.00 GATA 52 87

DNA Binding Domains

Protein ID Domain From To Sequence
NCU02356.1 GATA 934 969
NCU02356.2 GATA 934 969
NCU02356.3 GATA 934 969
NCU02356.4 GATA 934 969

Links

Other GATA family TFs
Other Neurospora crassa TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30174.m008836 Ricinus communis 30174.m008836 N 0.000
AMTR_s00059p00116150 Amborella trichopoda AMTR_s00059p00116150 N 0.000
cassava14439.m1 Manihot esculenta cassava14439.m1 N 0.000
cassava17724.valid.m1 Manihot esculenta cassava17724.valid.m1 N 0.000
Cla006768 Citrullus lanatus Cla006768 N 0.000
Cucsa.120560 Cucumis sativus Cucsa.120560 N 0.000
evm.TU.supercontig_145.1 Carica papaya evm.TU.supercontig_145.1 N 0.000
gene30812-v1.0-hybrid Fragaria vesca gene30812-v1.0-hybrid N 0.000
Gorai.007G089600 Gossypium raimondii Gorai.007G089600 N 0.000
Lus10009283.g Linum usitatissimum Lus10009283.g N 0.000
Pavir.Ab00578 Panicum virgatum Pavir.Ab00578 N 0.000
PDK_20s1530701g001 Phoenix dactylifera PDK_20s1530701g001 N 0.000
PK01122.1 Cannabis sativa PK01122.1 N 0.000
PK22765.1 Cannabis sativa PK22765.1 N 0.000
Sb04g004830 Sorghum bicolor Sb04g004830 N 0.000
TCM_005554 Theobroma cacao TCM_005554 N 0.000