CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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genemark-nMf.1.1.scaf22123-processed-gene-0.0
(
Meloidogyne floridensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
genemark-nMf.1.1.scaf22123-processed-gene-0.0
T197495_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
genemark-nMf.1.1.scaf22123-processed-gene-0.0-mRNA-1
GATA
20
56
CFTCGATTTSHWYLNSNPEQFICHACYMKQLRIKKKL
Links
Other
GATA
family TFs
Other
Meloidogyne floridensis
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin100079
Clonorchis sinensis
csin100079
N
ECANG7_10971
Echinococcus canadensis
ECANG7_10971
N
EmuJ_000551700
Echinococcus multilocularis
EmuJ_000551700
N
HDID_0001097601
Hymenolepis diminuta
HDID_0001097601
N
HmN_000362800
Hymenolepis microstoma
HmN_000362800
N
HNAJ_0001293101
Hymenolepis nana
HNAJ_0001293101
N
SCUD_0001903101
Schistosoma curassoni
SCUD_0001903101
N
SMTD_0001434401
Schistosoma mattheei
SMTD_0001434401
N
SROB_0001000801
Schistosoma rodhaini
SROB_0001000801
N
SSLN_0001781901
Schistocephalus solidus
SSLN_0001781901
N
TASK_0000238201
Taenia asiatica
TASK_0000238201
N
TRE_0000842101
Trichobilharzia regenti
TRE_0000842101
N
TsM_000735400
Taenia solium
TsM_000735400
N