CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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maker-nMf.1.1.scaf25550-snap-gene-0.4
(
Meloidogyne floridensis
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
maker-nMf.1.1.scaf25550-snap-gene-0.4
T197642_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
maker-nMf.1.1.scaf25550-snap-gene-0.4-mRNA-1
GATA
93
120
CFNCRVTQTKHWYKYLKENYLCKPCHDF
Links
Other
GATA
family TFs
Other
Meloidogyne floridensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ATCDC5
Vitis vinifera
VIT_14s0036g00510
N
CDC5L
Procavia capensis
ENSPCAG00000011444
N
CDC5L
Pan troglodytes
ENSPTRG00000018224
N
DICVIV_13293
Dictyocaulus viviparus
DICVIV_13293
N
maker-nMf.1.1.scaf08037-snap-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf08037-snap-gene-0.5
N
MPER_03657
Moniliophthora perniciosa
MPER_03657
N
PDK_20s1545291g001
Phoenix dactylifera
PDK_20s1545291g001
N
PEQ_0000123601
Parascaris equorum
PEQ_0000123601
N
PGTG_19241
Puccinia graminis
PGTG_19241
N