CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLLA0_E23431g
(
Kluyveromyces lactis
)
GCR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF12550 (GCR1_C)
IPR022210
KLLA0_E23431g
T198517_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GCR1
M00914_2.00
Saccharomyces cerevisiae
RGVDDCBWVW
WBWVGHHBCY
PBM
Gordan et al.(2011)
Gcr1
0.759
0.759
GCR1
M08569_2.00
Saccharomyces cerevisiae
VCTTCCH
DGGAAGB
Misc
DeBoer et al.(2011)
YPL075W_2071
0.759
0.759
GCR1
M10606_2.00
Saccharomyces cerevisiae
RKCTTCCWS
SWGGAAGYY
Transfac
Matys et al.(2006)
F$GCR1_01
0.759
0.759
GCR1
M10607_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$GCR1_B
0.759
0.759
GCR1
M10608_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$GCR1_Q4
0.759
0.759
GCR1
M08456_2.00
Saccharomyces cerevisiae
RKCTTCCW
WGGAAGMY
COMPILED
Mathelier et al.(2014)
MA0304.1
0.759
0.759
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAH00096
GCR1
604
699
YKLSRDNKTIWDLYNEWYHGLNGKLSIKELIEKYGYRRWKVTEDSHFFPTRRIIIDYIETETDRSINLKRFNLNSPLLKDRDAVRKHIVKDLETFR
Links
Other
GCR1
family TFs
Other
Kluyveromyces lactis
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
22012_YPL075W
Saccharomyces mikatae
22012_YPL075W
I
0.759
22618_YPL075W
Saccharomyces paradoxus
22618_YPL075W
I
0.759
AACERI_AaceriAEL245W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAEL245W
I
0.772
AGOS_AEL245W
Ashbya gossypii
AGOS_AEL245W
I
0.759
CAGL0H05379g
Candida glabrata
CAGL0H05379g
I
0.759
Ecym_7037
Eremothecium cymbalariae
Ecym_7037
I
0.734
GCR1
Saccharomyces cerevisiae
YPL075W
D
0.759
KAFR_0E00910
Kazachstania africana
KAFR_0E00910
I
0.759
KLTH0E12584g
Lachancea thermotolerans
KLTH0E12584g
I
0.772
KLTH0E12584g
Kluyveromyces thermotolerans
KLTH0E12584g
I
0.772
KNAG_0A01950
Kazachstania naganishii
KNAG_0A01950
I
0.734
Kpol_1048p60
Vanderwaltozyma polyspora
Kpol_1048p60
I
0.734
Kwal_12044
Kluyveromyces waltii
Kwal_12044
I
0.734
LALA0_S04e03466g
Lachancea lanzarotensis
LALA0_S04e03466g
I
0.747
NCAS_0C02090
Naumovozyma castellii
NCAS_0C02090
I
0.734
NDAI_0E02800
Naumovozyma dairenensis
NDAI_0E02800
I
0.797
SAKL0H10010g
Lachancea kluyveri
SAKL0H10010g
I
0.734
Scas_Contig664.15
Saccharomyces castellii
Scas_Contig664.15
I
0.734
SKUD_192107
Saccharomyces kudriavzevii
SKUD_192107
I
0.759
TBLA_0B04590
Tetrapisispora blattae
TBLA_0B04590
I
0.722
TDEL_0B03030
Torulaspora delbrueckii
TDEL_0B03030
I
0.734
TPHA_0I01890
Tetrapisispora phaffii
TPHA_0I01890
I
0.734
ZBAI_01205
Zygosaccharomyces bailii
ZBAI_01205
I
0.734
ZBAI_07289
Zygosaccharomyces bailii
ZBAI_07289
I
0.734
ZYRO0D03916g
Zygosaccharomyces rouxii
ZYRO0D03916g
I
0.747