CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSDNOG00000018905
(
Dasypus novemcinctus
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04516 (CP2)
IPR007604
ENSDNOG00000018905
T198962_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
UBP1
M04893_2.00
Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN
SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX
0.850
0.850
UBP1
M10614_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6_01
0.850
0.850
UBP1
M10615_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP1_Q6
0.850
0.850
UBP1
M04894_2.00
Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH
SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX
0.850
0.850
ENSGALG00000002235
M02030_2.00
Gallus gallus
AACCGGTTA
TAACCGGTT
PBM
Weirauch et al.(2014)
pTH8565
0.826
0.826
TFCP2L1
M04885_2.00
Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX
0.787
0.787
TFCP2L1
M10609_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LBP9_01
0.787
0.787
TFCP2L1
M04886_2.00
Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH
SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX
0.787
0.787
Tcfcp2l1
M08029_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1
0.763
0.763
Tcfcp2l1
M08030_2.00
Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG
ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1
0.763
0.763
Tcfcp2l1
M09127_2.00
Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH
Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C
0.763
0.763
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDNOP00000028043
Grainyhead
44
257
PIFKQEDSNLPLDGDTEHPPFQYVMCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGDMEICGKLIKSIIRVVFHDRRLQYTEHQQLEGWKWNRPGDRLLDDGNIPMSVGIIDTRTNPSQLNAVEFLWDPAKYTSAFIQVHCISTEFTPQKHGGEKGVPFRIQIDTFKQNENGEYTDHLHSASRQMKVFKPKGADRKQKTDREKMEKRTAH
Links
Other
Grainyhead
family TFs
Other
Dasypus novemcinctus
TFs
183 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CADANGAG00007590
Aspergillus niger
CADANGAG00007590
I
CC1G_07059
Coprinopsis cinerea
CC1G_07059
N
fgenesh1_pg.sca_72_chr7_6_0000012
Nectria haematococca
fgenesh1_pg.sca_72_chr7_6_0000012
N
fgenesh1_pm.00153_#_158
Aspergillus carbonarius
fgenesh1_pm.00153_#_158
I
Pc13g06530
Penicillium chrysogenum
Pc13g06530
N
PCH_Pc13g06530
Penicillium rubens
PCH_Pc13g06530
N
PEX1_099950
Penicillium expansum
PEX1_099950
N
PITC_065540
Penicillium italicum
PITC_065540
N
U727_00430311331
Penicillium solitum
U727_00430311331
N
VHEMI02171
Torrubiella hemipterigena
VHEMI02171
I