UBP1 (Equus caballus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSECAG00000018555 T198976_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.904 0.904
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.904 0.904
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.904 0.904
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.904 0.904
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.856 0.856
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.809 0.809
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.809 0.809
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.809 0.809
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.780 0.780
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.780 0.780
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.780 0.780
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSECAP00000016622 Grainyhead 40 253

Links

Other Grainyhead family TFs
Other Equus caballus TFs

188 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003708.1 Alligator sinensis Alligator_sinensis_CCG003708.1 N
Cmyd_10013223 Chelonia mydas Cmyd_10013223 N
ENSAMEG00000017065 Ailuropoda melanoleuca ENSAMEG00000017065 N
ENSAMXG00000008132 Astyanax mexicanus ENSAMXG00000008132 N
ENSBTAP00000019870-D1 Bos grunniens ENSBTAP00000019870-D1 N
ENSCSAG00000008212 Chlorocebus sabaeus ENSCSAG00000008212 N
ENSGMOG00000003455 Gadus morhua ENSGMOG00000003455 N
ENSLOCG00000000650 Lepisosteus oculatus ENSLOCG00000000650 N
ENSMEUG00000004384 Macropus eugenii ENSMEUG00000004384 N
ENSMPUG00000003040 Mustela putorius furo ENSMPUG00000003040 N
ENSNLEG00000006104 Nomascus leucogenys ENSNLEG00000006104 N
ENSOARG00000005005 Ovis aries ENSOARG00000005005 N
ENSONIG00000005476 Oreochromis niloticus ENSONIG00000005476 N
ENSP00000311196 Macaca fascicularis ENSP00000311196 N
ENSPANG00000007006 Papio anubis ENSPANG00000007006 N
ENSPFOG00000009551 Poecilia formosa ENSPFOG00000009551 N
ENSPPYG00000003026 Pongo abelii ENSPPYG00000003026 N
ENSSHAG00000009488 Sarcophilus harrisii ENSSHAG00000009488 N
ENSSTOG00000023146 Ictidomys tridecemlineatus ENSSTOG00000023146 N
ENSTSYG00000001991 Tarsius syrichta ENSTSYG00000001991 N
ENSXMAG00000013170 Xiphophorus maculatus ENSXMAG00000013170 N
Myotis_brandtii_NPAS4_10030769 Myotis brandtii Myotis_brandtii_NPAS4_10030769 N
npas4 Xenopus tropicalis XB-GENE-993002 N
NPAS4 Sus scrofa ENSSSCG00000012942 N
NPAS4 Ochotona princeps ENSOPRG00000008977 N
NPAS4 Pan troglodytes ENSPTRG00000003923 N
NPAS4 Pteropus vampyrus ENSPVAG00000001233 N
NPAS4 Tursiops truncatus ENSTTRG00000001951 N
Npas4 Rattus norvegicus ENSRNOG00000020009 N
NPAS4 Sorex araneus ENSSARG00000003603 N
NPAS4 Oryctolagus cuniculus ENSOCUG00000000905 N
NPAS4 Bos taurus ENSBTAG00000014925 N
NPAS4 Canis familiaris ENSCAFG00000012711 N
NPAS4 Callithrix jacchus ENSCJAG00000001482 N
NPAS4 Cavia porcellus ENSCPOG00000000685 N
NPAS4 Dasypus novemcinctus ENSDNOG00000042408 N
NPAS4 Equus caballus ENSECAG00000013683 N
NPAS4 Erinaceus europaeus ENSEEUG00000004685 N
NPAS4 Echinops telfairi ENSETEG00000003654 N
NPAS4 Felis catus ENSFCAG00000009299 N
NPAS4 Homo sapiens ENSG00000174576 N
NPAS4 Loxodonta africana ENSLAFG00000011138 N
NPAS4 Microcebus murinus ENSMICG00000003754 N
NPAS4 Myotis lucifugus ENSMLUG00000004042 N
NPAS4 Macaca mulatta ENSMMUG00000015982 N
NPAS4 Monodelphis domestica ENSMODG00000008299 N
Npas4 Mus musculus ENSMUSG00000045903 N
NPAS4 Otolemur garnettii ENSOGAG00000010446 N
npas4a Gasterosteus aculeatus ENSGACG00000017076 N
npas4a Tetraodon nigroviridis ENSTNIG00000016823 N
npas4a Takifugu rubripes ENSTRUG00000011857 N
npas4a Danio rerio ENSDARG00000055752 N
npas4a Oryzias latipes ENSORLG00000001999 N
npas4b Danio rerio ENSDARG00000087753 N
Ogr08183 Ophisaurus gracilis Ogr08183 N
Pvit_07066 Pogona vitticeps Pvit_07066 N