CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSONIG00000004467 *(Oreochromis niloticus)* Grainyhead
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF04516 (CP2)	IPR007604	ENSONIG00000004467	T199148_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
TFCP2L1 M04885_2.00	Homo sapiens	DCYRGHHNNNDCYRGH	DCYRGHNNNDDCYRGH	SELEX Yin et al.(2017) TFCP2L1_eDBD_HT-SELEX	0.732	0.732
TFCP2L1 M10609_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$LBP9_01	0.732	0.732
TFCP2L1 M04886_2.00	Homo sapiens	DCYRGHHNNDDCYRGH	DCYRGHHNNDDCYRGH	SELEX Yin et al.(2017) TFCP2L1_eDBD_Methyl-HT-SELEX	0.732	0.732
ENSGALG00000002235 M02030_2.00	Gallus gallus	AACCGGTTA	TAACCGGTT	PBM Weirauch et al.(2014) pTH8565	0.727	0.727
Tcfcp2l1 M08029_2.00	Mus musculus	CYRGYYYHDDCYRGHYYNNNN	NNNNRRDCYRGHHDRRRCYRG	ChIP-seq Chen et al.(2011) SRP000217_Tcfc2pI1	0.727	0.727
Tcfcp2l1 M08030_2.00	Mus musculus	CYRGYYYHDDCYRGHYYNNNN	NNNNRRDCYRGHHDRRRCYRG	ChIP-seq Chen et al.(2011) SRP000217_Tcfcp2I1	0.727	0.727
Tcfcp2l1 M09127_2.00	Mus musculus	DDCYRGYTYHNDCYRGHYB	VRDCYRGHNDRARCYRGHH	Misc Kulakovskiy et al.(2013) TF2L1_MOUSE.H11MO.0.C	0.727	0.727
For this family, TFs with SR scores > 0.700* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSONIP00000005624	Grainyhead	3	213	LKNEEARLMAENGAKRTPFQYILCAATSPAVKQQEEALTYLNQGQSYEIRMLNRKLVEYTDISSKYVKSIVRVVFHDRRLQYMEHQQLEGWRWNRPGDRILDIDIPLSVGILEPRSDPLHLNTIEFLWDPLKNASVFIQVNCISTEFTPRKHGGEKGVPFRIQVDTYTTNEHGEYVEHVHSSSCQVKVFKPKGADRKLKTDREKIDKKTPQ

Links
Other Grainyhead family TFs
Other *Oreochromis niloticus* TFs