Grhl1 (Rattus norvegicus)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04516 (CP2) IPR007604 ENSRNOG00000054989 T199219_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GRHL1
M03071_2.00 		Homo sapiens
RACYKGWHNDWCMGGTT
AACCKGWHNDWCMRGTY		 SELEX
Jolma et al.(2013)
GRHL1_1 		0.847 0.847
GRHL1
M03072_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Jolma et al.(2013)
GRHL1_2 		0.847 0.847
GRHL1
M03073_2.00 		Homo sapiens
HWAACCGGTTTD
HAAACCGGTTWD		 SELEX
Jolma et al.(2013)
GRHL1_3 		0.847 0.847
GRHL1
M04887_2.00 		Homo sapiens
DAACCGGTTH
DAACCGGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_HT-SELEX 		0.847 0.847
GRHL1
M04888_2.00 		Homo sapiens
DAACMKGTTH
DAACMKGTTH		 SELEX
Yin et al.(2017)
GRHL1_eDBD_Methyl-HT-SELEX 		0.847 0.847
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000068887 Grainyhead 135 349

Links

Other Grainyhead family TFs
Other Rattus norvegicus TFs

52 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_06171 Beauveria bassiana BBA_06171 N
CFIO01_13458 Colletotrichum fioriniae CFIO01_13458 N
CGGC5_14960 Colletotrichum gloeosporioides CGGC5_14960 N
CH063_08257 Colletotrichum higginsianum CH063_08257 N
CMQ_6554 Grosmannia clavigera CMQ_6554 N
Cob_00977 Colletotrichum orbiculare Cob_00977 N
CPUR_00391 Claviceps purpurea CPUR_00391 N
CSUB01_07108 Colletotrichum sublineola CSUB01_07108 N
e_gw1.12.29.1 Nectria haematococca e_gw1.12.29.1 N
F503_07767 Ophiostoma piceae uamh F503_07767 N
FFUJ_08350 Fusarium fujikuroi FFUJ_08350 N
FGRRES_17506 Fusarium graminearum FGRRES_17506 N
FPSE_09853 Fusarium pseudograminearum FPSE_09853 N
FVEG_11526 Fusarium verticillioides FVEG_11526 N
GLRG_06899 Colletotrichum graminicola GLRG_06899 N
MAJ_01611 Metarhizium majus MAJ_01611 N
MBR_04607 Metarhizium brunneum MBR_04607 N
MGU_04174 Metarhizium guizhouense MGU_04174 N
NechaG39963 Fusarium solani NechaG39963 N
S40288_00584 Stachybotrys chartarum S40288_00584 N
SAPIO_CDS6036 Scedosporium apiospermum SAPIO_CDS6036 N
TRIREDRAFT_67483 Trichoderma reesei TRIREDRAFT_67483 N
TRIVIDRAFT_188871 Trichoderma virens TRIVIDRAFT_188871 N
UV8b_5187 Ustilaginoidea virens UV8b_5187 N
VDAG_07545 Verticillium dahliae VDAG_07545 N
VHEMI09510 Torrubiella hemipterigena VHEMI09510 N
X797_007299 Metarhizium robertsii X797_007299 N