CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GPUH_0000076201
(
Gongylonema pulchrum
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
GPUH_0000076201
T199694_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GPUH_0000076201-mRNA-1
Grainyhead
2
197
ISNSGVEYVLEAPISTSVRKEDDRMTYVNKGQFYTVSLDYIPDLCKPLKSPTVKSQLMIVFREDKTYEEEIKTWQFWHSRQHSVKQRILEIDAKNSSGMIGQIEEIAHNAVQFYWNPTEQSSVKISIAVQCLSTDFSNQKGVKGLPLHIQIDTYDENDNADVPFHRGYCQIKVFCDKGAERKLRDEDKRAQKRKLA
Links
Other
Grainyhead
family TFs
Other
Gongylonema pulchrum
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACOC_0000493901
Angiostrongylus costaricensis
ACOC_0000493901
N
0.845
ALUE_0000347301
Ascaris lumbricoides
ALUE_0000347301
N
0.819
ANCCAN_14716
Ancylostoma caninum
ANCCAN_14716
N
0.789
ANCCEY_13935
Ancylostoma ceylanicum
ANCCEY_13935
N
0.758
ASIM_0001085501
Anisakis simplex
ASIM_0001085501
N
0.943
ASU_10686
Ascaris suum
ASU_10686
N
0.819
Bm6679
Brugia malayi
Bm6679
N
0.861
BXY_1053400
Bursaphelenchus xylophilus
BXY_1053400
N
0.716
CBG08484
Caenorhabditis briggsae
CBG08484
N
0.712
CBN22200
Caenorhabditis brenneri
CBN22200
N
0.804
CRE28107
Caenorhabditis remanei
CRE28107
N
0.799
DICVIV_02142
Dictyocaulus viviparus
DICVIV_02142
N
0.794
DME_0000295201
Dracunculus medinensis
DME_0000295201
N
0.902
EEL_0000257001
Elaeophora elaphi
EEL_0000257001
N
0.855
grh-1
Caenorhabditis elegans
WBGene00001707
N
0.809
HPLM_0001248301
Haemonchus placei
HPLM_0001248301
N
0.845
MhA1_Contig3342.frz3.fgene1
Meloidogyne hapla
MhA1_Contig3342.frz3.fgene1
I
0.806
nAv.1.0.1.g04294
Acanthocheilonema viteae
nAv.1.0.1.g04294
N
0.897
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.808
nDi.2.2.2.g12190
Dirofilaria immitis
nDi.2.2.2.g12190
N
0.855
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.945
NECAME_01451
Necator americanus
NECAME_01451
N
0.840
nLs.2.1.2.g09328
Litomosoides sigmodontis
nLs.2.1.2.g09328
N
0.897
nOo.2.0.1.g11935
Onchocerca ochengi
nOo.2.0.1.g11935
N
0.940
PEQ_0000501101
Parascaris equorum
PEQ_0000501101
N
0.881
PTRK_0001384100
Parastrongyloides trichosuri
PTRK_0001384100
N
0.740
SMUV_0000990001
Syphacia muris
SMUV_0000990001
N
0.802
SPAL_0001441800
Strongyloides papillosus
SPAL_0001441800
N
0.704
SSTP_0000594700
Strongyloides stercoralis
SSTP_0000594700
N
0.814
TCNE_0000897001
Toxocara canis
TCNE_0000897001
N
0.892
TELCIR_08176
Teladorsagia circumcincta
TELCIR_08176
N
0.845
TMUE_s0024003700
Trichuris muris
TMUE_s0024003700
N
0.758
TMUE_s0040003800
Trichuris muris
TMUE_s0040003800
N
0.753
TTRE_0000249401
Trichuris trichiura
TTRE_0000249401
N
0.727
TTRE_0000375101
Trichuris trichiura
TTRE_0000375101
N
0.706
WBGene00238278
Onchocerca volvulus
WBGene00238278
N
0.907