CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TTRE_0000249401
(
Trichuris trichiura
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
TTRE_0000249401
T199762_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TTRE_0000249401
Grainyhead
162
381
SKEYNGSRSSHTSDRVVTSRESPVHIPKIITSVGFQYTLEAPISTSVRKEDDRMTYINKGQFYTVTLEYIPDILKPLKSSVMMVVFREEKSYEEEVKSWQFWHARQHSMKQRILEADSKNSSGIIGGIEEIAHNAIQFYWNPVEQPVKINVAVQCLSTDFSNQKGVKGLPLHLQIDTFDEAHNKNVPFHRGYCQIKVFCDKGANRKMLHEQRRDEKRRLQ
Links
Other
Grainyhead
family TFs
Other
Trichuris trichiura
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0000008501
Angiostrongylus cantonensis
ACAC_0000008501
N
0.779
D918_02299
Trichuris suis
D918_02299
N
0.851
D918_05744
Trichuris suis
D918_05744
N
0.742
EFV54566
Trichinella spiralis
EFV54566
N
0.777
GPUH_0000076201
Gongylonema pulchrum
GPUH_0000076201
N
0.727
nAv.1.0.1.g04294
Acanthocheilonema viteae
nAv.1.0.1.g04294
N
0.724
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.769
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
0.818
nLs.2.1.2.g09328
Litomosoides sigmodontis
nLs.2.1.2.g09328
N
0.716
nOo.2.0.1.g11935
Onchocerca ochengi
nOo.2.0.1.g11935
N
0.746
OESDEN_24323
Oesophagostomum dentatum
OESDEN_24323
N
0.757
PEQ_0000501101
Parascaris equorum
PEQ_0000501101
N
0.763
PPA28053
Pristionchus pacificus
PPA28053
N
0.729
TCNE_0000897001
Toxocara canis
TCNE_0000897001
N
0.725
TMUE_s0024003700
Trichuris muris
TMUE_s0024003700
N
0.936
TMUE_s0040003800
Trichuris muris
TMUE_s0040003800
N
0.830
TTRE_0000375101
Trichuris trichiura
TTRE_0000375101
N
0.859
WBGene00238278
Onchocerca volvulus
WBGene00238278
N
0.729