CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00004p00270570
(
Amborella trichopoda
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
AMTR_s00004p00270570
T199770_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERM93780
GRAS
154
524
LVHLLLACAEAVGCRDSSLANSILSQIWGLANPHGDSMQRVSFCFALGLTTRLALQQNVGLRGSFSNLGLDLELPSKEDKVEGFRLLYQLTPYIAFGFTIANDAIDQAAHGKDALHIIDLGMAHTLQWPPLIRTLASRLEGPPKLRITGVDVDPNSKELEENMKVLAMEASSLGVPFEFQLIVGPLSPSLLNMETLGSREGEALFVNSIMYLHKHVKESRGSLKSILQSIRKLNPTLFTLVEQEANHNGPFFLGRFLESLHYYSAIFDSLEASLPRPSPQRMKIERSHFAEEIRDIIAYEGLKRVERHERADQWRRQLGRAGFQVVGLKSMSQARMMLSVYGCDGYTLATEKGGLVLGWKGRSIMLASTWQ
Links
Other
GRAS
family TFs
Other
Amborella trichopoda
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006306
Ricinus communis
30169.m006306
N
0.704
cassava20476.m1
Manihot esculenta
cassava20476.m1
N
0.728
Ciclev10004715m.g
Citrus clementina
Ciclev10004715m.g
N
0.708
gene18499-v1.0-hybrid
Fragaria vesca
gene18499-v1.0-hybrid
N
0.717
orange1.1g009215m.g
Citrus sinensis
orange1.1g009215m.g
N
0.708
PK21020.1
Cannabis sativa
PK21020.1
N
0.771
Pm011106
Prunus mume
Pm011106
N
0.733
PRUPE_ppa004256mg
Prunus persica
PRUPE_ppa004256mg
N
0.730
TCM_033446
Theobroma cacao
TCM_033446
N
0.714