CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SLR1
(
Oryza indica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BGIOSGA013420
T199866_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA013420-PA
GRAS
241
621
LVHALLACAEAVQQENFAAAEALVKQIPTLAASQGGAMRKVAAYFGEALARRVYRFRPADSTLLDAAFADLLHAHFYESCPYLKFAHFTANQAILEAFAGCRRVHVVDFGIKQGMQWPALLQALALRPGGPPSFRLTGVGPPQPDETDALQQVGWKLAQFAHTIRVDFQYRGLVAATLADLEPFMLQPEGEADANEEPEVIAVNSVFELHRLLAQPGALEKVLGTVHAVRPRIVTVVEQEANHNSGSFLDRFTESLHYYSTMFDSLEGGSSGQAELSPPAAGGGGGTDQVMSEVYLGRQICNVVACEGAERTERHETLGQWRNRLGRAGFEPVHLGSNAYKQASTLLALFAGGDGYRVEEKEGCLTLGWHTRPLIATSAWR
Links
Other
GRAS
family TFs
Other
Oryza indica
TFs
62 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CERSUDRAFT_114551
Ceriporiopsis subvermispora
CERSUDRAFT_114551
N
estExt_fgeneshMC_pg.C_10568
Mucor circinelloides
estExt_fgeneshMC_pg.C_10568
I
FIBRA_03527
Fibroporia radiculosa
FIBRA_03527
N
FOMPIDRAFT_1061694
Fomitopsis pinicola
FOMPIDRAFT_1061694
N
GALMADRAFT_249226
Galerina marginata
GALMADRAFT_249226
N
GLOINDRAFT_221110
Rhizophagus irregularis
GLOINDRAFT_221110
I
GLOINDRAFT_24118
Rhizophagus irregularis
GLOINDRAFT_24118
I
GLOINDRAFT_58638
Rhizophagus irregularis
GLOINDRAFT_58638
I
HETIRDRAFT_18758
Heterobasidion irregulare
HETIRDRAFT_18758
N
K437DRAFT_223075
Tilletiaria anomala
K437DRAFT_223075
N
M404DRAFT_217927
Pisolithus tinctorius
M404DRAFT_217927
N
PaG_02114
Pseudozyma aphidis
PaG_02114
N
PAXRUDRAFT_823158
Paxillus rubicundulus
PAXRUDRAFT_823158
N
PFL1_06106
Pseudozyma flocculosa
PFL1_06106
N
PHACADRAFT_73403
Phanerochaete carnosa
PHACADRAFT_73403
N
PHLGIDRAFT_64854
Phlebiopsis gigantea
PHLGIDRAFT_64854
N
PHSY_006889
Pseudozyma hubeiensis
PHSY_006889
N
PISMIDRAFT_675296
Pisolithus microcarpus
PISMIDRAFT_675296
N
SCLCIDRAFT_1208555
Scleroderma citrinum
SCLCIDRAFT_1208555
N
sr11829
Sporisorium reilianum
sr11829
N
UHOR_00851
Ustilago hordei
UHOR_00851
N
UM00551
Ustilago maydis
UM00551
N