CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bo4g104900
(
Brassica oleracea
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bo4g104900
T199930_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bo4g104900.1
GRAS
200
563
ITEQLFNAAGELTGTDNNNPVLAQGILARLNQNLNNNLNNPKPPFQRAALYVTESLQSLLQPSLPPPHTLLLKIAAYRAFSETSPFLQFVNFTANQTILESLERFDRIRIVDFDVGFGGQWSSLIQELANRSSSAPLSSLKITSFSSPSTVSDKFELRFTEENLRAFAGETGVTFEMEMLNMETLLNPPLSLLRSSDKEAIAVNLPISSVISGYLPLILRFLKQISPNVVVCSDTIPDAPFPNAVVDALHYYTSLLESLESPNSSSQEAVASIERFCVQPWIQRLLTNRYRWMDKSPPWRSLFGQCGFTSVAMSQTAETQAEYLLQRNPMRGFHLEKRQSSSFTTSSLVLCWQKKELVAVSAWK
Links
Other
GRAS
family TFs
Other
Brassica oleracea
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.13158s0062
Boechera stricta
Bostr.13158s0062
N
0.734
Bra014479
Brassica rapa
Bra014479
N
0.934
Cagra.6011s0009
Capsella grandiflora
Cagra.6011s0009
N
0.734
Carubv10016840m.g
Capsella rubella
Carubv10016840m.g
N
0.733
HAM2
Arabidopsis lyrata
fgenesh2_kg.5__2529__AT3G60630.1
N
0.773
SCL22
Arabidopsis thaliana
AT3G60630
N
0.756
Thhalv10006506m.g
Eutrema salsugineum
Thhalv10006506m.g
N
0.743