CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra014479
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra014479
T199980_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra014479.1-P
GRAS
1
181
MEMLNMETLLNPPLSLIRSSEKEAIAVNLPISSVISGYLPLILRFLKQISPNVVVCSDTIPDAPFPNAVVDALQYYTSFLESLESPNSSQEAVTSIERFCVQPWMQRLLTNRYRWMEKSPPWRSLFGQCGFTAVAMSQTAETQAEYLLQRNPMRGFHLDKRQSSLVLCWQKRELVAVSAWK
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo4g104900
Brassica oleracea
Bo4g104900
N
0.934
HAM2
Arabidopsis lyrata
fgenesh2_kg.5__2529__AT3G60630.1
N
0.768