CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SCR
(
Arabidopsis lyrata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
fgenesh2_kg.5__1811__AT3G54220.1
T200127_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.5__1811__AT3G54220.1
GRAS
283
643
LLTLLLQCAEAVSADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQTHSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLGTSMEALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDTERLNVRKREAVAVHWLQHSLYDVTGSDAHTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGASYGEESEERHVVEQQLLSKEIRNVLAVGGPSRSGEVKFESWREKMQQCGFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAWT
Links
Other
GRAS
family TFs
Other
Arabidopsis lyrata
TFs
84 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCEY_01929
Ancylostoma ceylanicum
ANCCEY_01929
N
0.000
ANCDUO_19967
Ancylostoma duodenale
ANCDUO_19967
N
0.000
CRE29609
Caenorhabditis remanei
CRE29609
N
0.000
DICVIV_00304
Dictyocaulus viviparus
DICVIV_00304
N
0.000
HCOI01584000
Haemonchus contortus
HCOI01584000
N
0.000
HPLM_0000720101
Haemonchus placei
HPLM_0000720101
N
0.000
NBR_0000065601
Nippostrongylus brasiliensis
NBR_0000065601
N
0.000
NECAME_05919
Necator americanus
NECAME_05919
N
0.000
SVUK_0001641001
Strongylus vulgaris
SVUK_0001641001
N
0.000
TELCIR_17986
Teladorsagia circumcincta
TELCIR_17986
N
0.000
TELCIR_19586
Teladorsagia circumcincta
TELCIR_19586
N
0.000
TELCIR_20778
Teladorsagia circumcincta
TELCIR_20778
N
0.000