CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GSMUA_Achr6G24310_001
(
Musa acuminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GSMUA_Achr6G24310_001
T200387_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P24310_001
GRAS
165
535
VKQLLIKCAETLSKNKIKEFELLVEKARSVVSITGVPIQRLGAYMLEGLVARHKSSGTNIHRALRCREPESKELLSYMRILYDICPYFKFGYMAANGAIADALKKEDRIHIIDFQIAQGTRWVTLIQALAARPGGPPHVRITGIDDPVAEYTRGDGLHVVGKMLLDMSKKFNIPLEFKGLPVCEPEVTKEMLDVRLGEALAVNFTLQLHHTPDESDDVNNPGDGLLRLVKSLSPKVMTLVEQESNTNTTPFSSRFVETLDYYSAMFESVDVMLPKESKDRINVEQHCLAKDIVNIIACEGKDRIERHELLSKWRSRLSMAGFRPYPLSPYVNSVIKTLLGYYSDKYTLMEKDGALLLGWKNRNLVSASAWH
Links
Other
GRAS
family TFs
Other
Musa acuminata
TFs
63 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00043p00136400
Amborella trichopoda
AMTR_s00043p00136400
N
0.747
Aquca_005_00404
Aquilegia coerulea
Aquca_005_00404
N
0.717
BGIOSGA025902
Oryza indica
BGIOSGA025902
N
0.778
Bo9g009240
Brassica oleracea
Bo9g009240
N
0.740
BRADI1G25370
Brachypodium distachyon
BRADI1G25370
N
0.789
cassava24578.valid.m1
Manihot esculenta
cassava24578.valid.m1
N
0.724
Ca_06943
Cicer arietinum
Ca_06943
N
0.724
Ciclev10007843m.g
Citrus clementina
Ciclev10007843m.g
N
0.718
CIGR1
Oryza sativa
OS07G0545800
N
0.775
Cucsa.053270
Cucumis sativus
Cucsa.053270
N
0.732
Eucgr.F03414
Eucalyptus grandis
Eucgr.F03414
N
0.743
evm.TU.supercontig_3097.1
Carica papaya
evm.TU.supercontig_3097.1
N
0.713
F775_07373
Aegilops tauschii
F775_07373
N
0.780
gene03285-v1.0-hybrid
Fragaria vesca
gene03285-v1.0-hybrid
N
0.764
GLYMA06G41500
Glycine max
GLYMA06G41500
N
0.745
GLYMA12G16750
Glycine max
GLYMA12G16750
N
0.734
GLYMA12G34420
Glycine max
GLYMA12G34420
N
0.729
GLYMA13G36120
Glycine max
GLYMA13G36120
N
0.740
Gorai.002G080600
Gossypium raimondii
Gorai.002G080600
N
0.721
Gorai.009G427800
Gossypium raimondii
Gorai.009G427800
N
0.702
Gorai.013G164700
Gossypium raimondii
Gorai.013G164700
N
0.741
GRMZM5G821439
Zea mays
GRMZM5G821439
N
0.797
GSMUA_Achr8G03610_001
Musa acuminata
GSMUA_Achr8G03610_001
N
0.833
GSMUA_Achr8G03620_001
Musa acuminata
GSMUA_Achr8G03620_001
N
0.776
LjSGA_123909.1
Lotus japonicus
LjSGA_123909.1
N
0.729
Lus10035840.g
Linum usitatissimum
Lus10035840.g
N
0.710
MDP0000205622
Malus domestica
MDP0000205622
N
0.743
mgf007614m
Mimulus guttatus
mgf007614m
N
0.737
MLOC_37712
Hordeum vulgare
MLOC_37712
N
0.791
MTR_2g082090
Medicago truncatula
MTR_2g082090
N
0.726
OB07G23640
Oryza brachyantha
OB07G23640
N
0.789
OBART07G17780
Oryza barthii
OBART07G17780
N
0.778
OGLUM07G17420
Oryza glumaepatula
OGLUM07G17420
N
0.778
OLONG_024541
Oryza longistaminata
OLONG_024541
N
0.778
OMERI07G14660
Oryza meridionalis
OMERI07G14660
N
0.775
ONIVA07G16090
Oryza nivara
ONIVA07G16090
N
0.778
OPUNC07G16570
Oryza punctata
OPUNC07G16570
N
0.789
orange1.1g040563m.g
Citrus sinensis
orange1.1g040563m.g
N
0.719
ORGLA07G0142600
Oryza glaberrima
ORGLA07G0142600
N
0.778
ORUFI07G18480
Oryza rufipogon
ORUFI07G18480
N
0.778
Pavir.Bb02923
Panicum virgatum
Pavir.Bb02923
N
0.792
Pavir.J35699
Panicum virgatum
Pavir.J35699
N
0.792
PDK_20s1421311g003
Phoenix dactylifera
PDK_20s1421311g003
N
0.826
PGSC0003DMG400019232
Solanum tuberosum
PGSC0003DMG400019232
N
0.721
PGSC0003DMG400021802
Solanum tuberosum
PGSC0003DMG400021802
N
0.721
PK07026.1
Cannabis sativa
PK07026.1
N
0.732
Pm029452
Prunus mume
Pm029452
N
0.734
POPTR_0001s44090
Populus trichocarpa
POPTR_0001s44090
N
0.737
POPTR_0011s13460
Populus trichocarpa
POPTR_0011s13460
N
0.732
PRUPE_ppa003323mg
Prunus persica
PRUPE_ppa003323mg
N
0.745
SapurV1A.0327s0070
Salix purpurea
SapurV1A.0327s0070
N
0.713
SapurV1A.0664s0120
Salix purpurea
SapurV1A.0664s0120
N
0.732
SapurV1A.3085s0020
Salix purpurea
SapurV1A.3085s0020
N
0.732
Sb02g035680
Sorghum bicolor
Sb02g035680
N
0.797
Si029156m.g
Setaria italica
Si029156m.g
N
0.789
Solyc07g063940.1
Solanum lycopersicum
Solyc07g063940.1
N
0.726
Solyc12g005340.1
Solanum lycopersicum
Solyc12g005340.1
N
0.718
TCM_031132
Theobroma cacao
TCM_031132
N
0.732
Traes_2AS_620B821281
Triticum aestivum
Traes_2AS_620B821281
N
0.780
Traes_2BS_4600D4B54
Triticum aestivum
Traes_2BS_4600D4B54
N
0.791
Traes_2DS_2D035BAFD
Triticum aestivum
Traes_2DS_2D035BAFD
N
0.780
TRIUR3_35245
Triticum urartu
TRIUR3_35245
N
0.783
VIT_19s0014g04940
Vitis vinifera
VIT_19s0014g04940
N
0.753