CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI10G05450
(
Oryza meridionalis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OMERI10G05450
T200813_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI10G05450.1
GRAS
236
550
LKQVIIACGKAVAENDVRLKELLISELGQMVSVSGDPLQRLGAYMLEGLVARLSSSGSKIYKSLKCKEPTSSELMSYMHLLYEICPFFKFGYMSANGAIAEAIKGENFVHIIDFQIAQGSQWMTLIQALAARPGGPPFLRITGIDDSNSAYARGGGLDIVGMRLYKVAQSFGLPFEFNAVPAASHEVYLEHLDIRVGEVIVVNFAYQLHHTPDESVSTENHRDRILRMVKSLSPKLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDKRRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKA
OMERI10G05450.2
GRAS
146
310
LKQVIIACGKAVAENDVRLKELLISELGQMVSVSGDPLQRLGAYMLEGLVARLSSSGSKIYKSLKCKEPTSSELMSYMHLLYEICPFFKFGYMSANGAIAEAIKGENFVHIIDFQIAQGSQWMTLIQALAARPGGPPFLRITGIDDSNSAYARGGGLDIVGMRLM
OMERI10G05450.2
GRAS
307
453
MRLMVKSLSPKLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDKRRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSSVVNSTIKTLLHTYNSFYRLEERDGVLYLGWKNRVLVVSSAWS
OMERI10G05450.3
GRAS
264
634
LKQVIIACGKAVAENDVRLKELLISELGQMVSVSGDPLQRLGAYMLEGLVARLSSSGSKIYKSLKCKEPTSSELMSYMHLLYEICPFFKFGYMSANGAIAEAIKGENFVHIIDFQIAQGSQWMTLIQALAARPGGPPFLRITGIDDSNSAYARGGGLDIVGMRLYKVAQSFGLPFEFNAVPAASHEVYLEHLDIRVGEVIVVNFAYQLHHTPDESVSTENHRDRILRMVKSLSPKLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDKRRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSSVVNSTIKTLLHTYNSFYRLEERDGVLYLGWKNRVLVVSSAWC
OMERI10G05450.4
GRAS
146
516
LKQVIIACGKAVAENDVRLKELLISELGQMVSVSGDPLQRLGAYMLEGLVARLSSSGSKIYKSLKCKEPTSSELMSYMHLLYEICPFFKFGYMSANGAIAEAIKGENFVHIIDFQIAQGSQWMTLIQALAARPGGPPFLRITGIDDSNSAYARGGGLDIVGMRLYKVAQSFGLPFEFNAVPAASHEVYLEHLDIRVGEVIVVNFAYQLHHTPDESVSTENHRDRILRMVKSLSPKLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDKRRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSSVVNSTIKTLLHTYNSFYRLEERDGVLYLGWKNRVLVVSSAWC
OMERI10G05450.5
GRAS
191
561
LKQVIIACGKAVAENDVRLKELLISELGQMVSVSGDPLQRLGAYMLEGLVARLSSSGSKIYKSLKCKEPTSSELMSYMHLLYEICPFFKFGYMSANGAIAEAIKGENFVHIIDFQIAQGSQWMTLIQALAARPGGPPFLRITGIDDSNSAYARGGGLDIVGMRLYKVAQSFGLPFEFNAVPAASHEVYLEHLDIRVGEVIVVNFAYQLHHTPDESVSTENHRDRILRMVKSLSPKLVTLVEQESNTNTRPFFPRYLETLDYYTAMFESIDVALPRDDKRRMSAEQHCVARDIVNLIACEGAERVERHEVFGKWKARLTMAGFRPYPLSSVVNSTIKTLLHTYNSFYRLEERDGVLYLGWKNRVLVVSSAWC
Links
Other
GRAS
family TFs
Other
Oryza meridionalis
TFs
90 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL000577
Aedes aegypti
AAEL000577
I
AALB004223
Anopheles albimanus
AALB004223
I
ACEP20141
Atta cephalotes
ACEP20141
I
ACYPI29050
Acyrthosiphon pisum
ACYPI29050
I
AEPI006364
Anopheles epiroticus
AEPI006364
I
AFAF000103
Anopheles farauti
AFAF000103
I
AGAP005564
Anopheles gambiae
AGAP005564
I
AMEC008183
Anopheles melas
AMEC008183
I
AMEM013718
Anopheles merus
AMEM013718
I
ASTEI02169
Anopheles stephensi
ASTEI02169
I
BGIBMGA003479
Bombyx mori
BGIBMGA003479
I
Cflo_10585--XP_394553.3_APIME
Camponotus floridanus
Cflo_10585--XP_394553.3_APIME
I
DAPPUDRAFT_64332
Daphnia pulex
DAPPUDRAFT_64332
I
GA30279
Drosophila pseudoobscura
FBgn0263821
I
GB46725
Apis mellifera
GB46725
I
GD11322
Drosophila simulans
FBgn0183071
I
GF11678
Drosophila ananassae
FBgn0088718
I
GG21828
Drosophila erecta
FBgn0114006
I
GH22029
Drosophila grimshawi
FBgn0129490
I
GI19118
Drosophila mojavensis
FBgn0141857
I
GK22232
Drosophila willistoni
FBgn0224217
I
GL17227
Drosophila persimilis
FBgn0154830
I
GM21828
Drosophila sechellia
FBgn0176705
I
grh
Drosophila melanogaster
FBgn0259211
D
grh
Drosophila yakuba
FBgn0067967
I
HMEL013326
Heliconius melpomene
HMEL013326
I
Hsal_11404--XP_394553.3_APIME
Harpegnathos saltator
Hsal_11404--XP_394553.3_APIME
I
ISCW008081
Ixodes scapularis
ISCW008081
I
KGM_04625
Danaus plexippus
KGM_04625
I
LDEC013993
Leptinotarsa decemlineata
LDEC013993
N
LDEC013994
Leptinotarsa decemlineata
LDEC013994
I
LLOJ002492
Lutzomyia longipalpis
LLOJ002492
I
MCINX002723
Melitaea cinxia
MCINX002723
I
MDOA000476
Musca domestica
MDOA000476
I
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
nDi.2.2.2.g12300
Dirofilaria immitis
nDi.2.2.2.g12300
I
RPRC012881
Rhodnius prolixus
RPRC012881
I
SINV20218
Solenopsis invicta
SINV20218
I
TC004589
Tribolium castaneum
TC004589
I
tetur01g12650
Tetranychus urticae
tetur01g12650
I
YQE_09165
Dendroctonus ponderosae
YQE_09165
I