CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ONIVA03G24000
(
Oryza nivara
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ONIVA03G24000
T200839_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G24000.1
GRAS
188
602
AAQLLMECARAVAGRDSQRVQQLMWMLNELASPYGDVDQKLASYFLQGLFARLTTSGPRTLRTLATASDRNASFDSTRRTALKFQELSPWTPFGHVAANGAILESFLEAAAAGAAAASSSSSSSSTPPTRLHILDLSNTFCTQWPTLLEALATRSSDDTPHLSITTVVPTAAPSAAAQRVMREIGQRLEKFARLMGVPFSFRAVHHAGDLADLDLAALDLREGGATAALAVNCVNALRGVARGRDAFVASLRRLEPRVVTVVEEEADLAAPEADASSEADTDAAFVKVFGEGLRFFSAYMDSLEESFPKTSNERLSLERAVGRAIVDLVSCPASQSAERRETAASWARRMRSAGFSPAAFSEDVADDVRSLLRRYKEGWSMRDAGGATDDAAGAAAAGAFLAWKEQPVVWASAWK
Links
Other
GRAS
family TFs
Other
Oryza nivara
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAB21580
Xenopus laevis
AAB21580
I
AAB22139
Xenopus laevis
AAB22139
I
AAL11024
Xenopus tropicalis
AAL11024
I
Aan_R003723
Calypte anna
Aan_R003723
I
Aan_R006110
Calypte anna
Aan_R006110
I
AAO11649
Xenopus laevis
AAO11649
I
ABU42126
Xenopus laevis
ABU42126
I
Afo_R014067
Aptenodytes forsteri
Afo_R014067
I
Alligator_sinensis_CCG017418.1
Alligator sinensis
Alligator_sinensis_CCG017418.1
I
Alligator_sinensis_CCG017419.1
Alligator sinensis
Alligator_sinensis_CCG017419.1
I
Alligator_sinensis_CCG018754.1
Alligator sinensis
Alligator_sinensis_CCG018754.1
I
Brh_R000054
Buceros rhinoceros
Brh_R000054
I
CLEC002330
Cimex lectularius
CLEC002330
I
D917_06339
Trichinella nativa
D917_06339
I
D918_04086
Trichuris suis
D918_04086
I
EFV52759
Trichinella spiralis
EFV52759
I
ENSAMEG00000012326
Ailuropoda melanoleuca
ENSAMEG00000012326
I
ENSAMEG00000013193
Ailuropoda melanoleuca
ENSAMEG00000013193
I
ENSAMEG00000013207
Ailuropoda melanoleuca
ENSAMEG00000013207
I
ENSAMXG00000000425
Astyanax mexicanus
ENSAMXG00000000425
I
ENSAMXG00000000428
Astyanax mexicanus
ENSAMXG00000000428
I
ENSAMXG00000007437
Astyanax mexicanus
ENSAMXG00000007437
I
ENSAMXG00000017040
Astyanax mexicanus
ENSAMXG00000017040
I
ENSAPLG00000001124
Anas platyrhynchos
ENSAPLG00000001124
I
ENSAPLG00000002254
Anas platyrhynchos
ENSAPLG00000002254
I
ENSBTAP00000007923-D1
Bos grunniens
ENSBTAP00000007923-D1
I
ENSCPOG00000007763
Cavia porcellus
ENSCPOG00000007763
I
ENSCSAG00000003889
Chlorocebus sabaeus
ENSCSAG00000003889
I
ENSCSAG00000003893
Chlorocebus sabaeus
ENSCSAG00000003893
I
ENSCSAG00000014291
Chlorocebus sabaeus
ENSCSAG00000014291
I
ENSFALG00000002471
Ficedula albicollis
ENSFALG00000002471
I
ENSFALG00000010503
Ficedula albicollis
ENSFALG00000010503
I
ENSFALG00000010507
Ficedula albicollis
ENSFALG00000010507
I
ENSLACG00000010731
Latimeria chalumnae
ENSLACG00000010731
I
ENSLACG00000014874
Latimeria chalumnae
ENSLACG00000014874
I
ENSLOCG00000010722
Lepisosteus oculatus
ENSLOCG00000010722
I
ENSMEUG00000010618
Macropus eugenii
ENSMEUG00000010618
I
ENSMEUG00000010628
Macropus eugenii
ENSMEUG00000010628
I
ENSMEUG00000015462
Macropus eugenii
ENSMEUG00000015462
I
ENSMGAG00000011091
Meleagris gallopavo
ENSMGAG00000011091
I
ENSMICG00000011211
Microcebus murinus
ENSMICG00000011211
I
ENSMMUG00000000064
Macaca mulatta
ENSMMUG00000000064
I
ENSMPUG00000004935
Mustela putorius furo
ENSMPUG00000004935
I
ENSMPUG00000004945
Mustela putorius furo
ENSMPUG00000004945
I
ENSMPUG00000011508
Mustela putorius furo
ENSMPUG00000011508
I
ENSNLEG00000005194
Nomascus leucogenys
ENSNLEG00000005194
I
ENSNLEG00000005207
Nomascus leucogenys
ENSNLEG00000005207
I
ENSNLEG00000018108
Nomascus leucogenys
ENSNLEG00000018108
I
ENSOARG00000015145
Ovis aries
ENSOARG00000015145
I
ENSOARG00000015159
Ovis aries
ENSOARG00000015159
I
ENSONIG00000000007
Oreochromis niloticus
ENSONIG00000000007
I
ENSONIG00000000077
Oreochromis niloticus
ENSONIG00000000077
I
ENSONIG00000010796
Oreochromis niloticus
ENSONIG00000010796
I
ENSONIG00000019313
Oreochromis niloticus
ENSONIG00000019313
I
ENSP00000228641
Macaca fascicularis
ENSP00000228641
I
ENSP00000228641-D1
Bos grunniens
ENSP00000228641-D1
I
ENSP00000228644
Macaca fascicularis
ENSP00000228644
I
ENSP00000241651
Macaca fascicularis
ENSP00000241651
I
ENSPANG00000007910
Papio anubis
ENSPANG00000007910
I
ENSPANG00000016865
Papio anubis
ENSPANG00000016865
I
ENSPANG00000020394
Papio anubis
ENSPANG00000020394
I
ENSPFOG00000013532
Poecilia formosa
ENSPFOG00000013532
I
ENSPFOG00000017279
Poecilia formosa
ENSPFOG00000017279
I
ENSPFOG00000017488
Poecilia formosa
ENSPFOG00000017488
I
ENSPFOG00000017498
Poecilia formosa
ENSPFOG00000017498
I
ENSPPYG00000000338
Pongo abelii
ENSPPYG00000000338
I
ENSPPYG00000004799
Pongo abelii
ENSPPYG00000004799
I
ENSPPYG00000004800
Pongo abelii
ENSPPYG00000004800
I
ENSPSIG00000012000
Pelodiscus sinensis
ENSPSIG00000012000
I
ENSPSIG00000012468
Pelodiscus sinensis
ENSPSIG00000012468
I
ENSSHAG00000013331
Sarcophilus harrisii
ENSSHAG00000013331
I
ENSSHAG00000013391
Sarcophilus harrisii
ENSSHAG00000013391
I
ENSSHAG00000016307
Sarcophilus harrisii
ENSSHAG00000016307
I
ENSSSCG00000015475
Sus scrofa
ENSSSCG00000015475
I
ENSSTOG00000015808
Ictidomys tridecemlineatus
ENSSTOG00000015808
I
ENSSTOG00000015810
Ictidomys tridecemlineatus
ENSSTOG00000015810
I
ENSSTOG00000028049
Ictidomys tridecemlineatus
ENSSTOG00000028049
I
ENSTGUG00000007755
Taeniopygia guttata
ENSTGUG00000007755
I
ENSTSYG00000003282
Tarsius syrichta
ENSTSYG00000003282
I
ENSTSYG00000009118
Tarsius syrichta
ENSTSYG00000009118
I
ENSXMAG00000003931
Xiphophorus maculatus
ENSXMAG00000003931
I
ENSXMAG00000007430
Xiphophorus maculatus
ENSXMAG00000007430
I
ENSXMAG00000017492
Xiphophorus maculatus
ENSXMAG00000017492
I
ENSXMAG00000017496
Xiphophorus maculatus
ENSXMAG00000017496
I
estExt_fgenesh2_pg.C_2260029
Branchiostoma floridae
estExt_fgenesh2_pg.C_2260029
I
estExt_gwp.C_290160
Branchiostoma floridae
estExt_gwp.C_290160
I
Gfo_R003967
Geospiza fortis
Gfo_R003967
I
Gfo_R007711
Geospiza fortis
Gfo_R007711
I
MYF5
Anolis carolinensis
ENSACAG00000014431
I
MYF5
Bos taurus
ENSBTAG00000026972
I
MYF5
Canis familiaris
ENSCAFG00000005808
I
MYF5
Choloepus hoffmanni
ENSCHOG00000008319
I
MYF5
Callithrix jacchus
ENSCJAG00000019340
I
MYF5
Cavia porcellus
ENSCPOG00000007766
I
myf5
Danio rerio
ENSDARG00000007277
I
MYF5
Dasypus novemcinctus
ENSDNOG00000034747
I
Myf5
Dipodomys ordii
ENSDORG00000015437
I
MYF5
Equus caballus
ENSECAG00000020047
I
MYF5
Erinaceus europaeus
ENSEEUG00000011612
I
MYF5
Echinops telfairi
ENSETEG00000011255
I
MYF5
Felis catus
ENSFCAG00000015011
I
MYF5
Homo sapiens
ENSG00000111049
D
MYF5
Gallus gallus
ENSGALG00000028091
I
MYF5
Gorilla gorilla
ENSGGOG00000004366
I
MYF5
Loxodonta africana
ENSLAFG00000016473
I
MYF5
Myotis lucifugus
ENSMLUG00000004943
I
MYF5
Macaca mulatta
ENSMMUG00000011669
I
MYF5
Monodelphis domestica
ENSMODG00000020478
I
Myf5
Mus musculus
ENSMUSG00000000435
D
MYF5
Ornithorhynchus anatinus
ENSOANG00000004853
I
MYF5
Oryctolagus cuniculus
ENSOCUG00000025477
I
MYF5
Otolemur garnettii
ENSOGAG00000001039
I
MYF5
Ochotona princeps
ENSOPRG00000009007
I
myf5
Oryzias latipes
ENSORLG00000016257
I
MYF5
Procavia capensis
ENSPCAG00000001722
I
MYF5
Pan troglodytes
ENSPTRG00000005261
I
MYF5
Pteropus vampyrus
ENSPVAG00000003336
I
Myf5
Rattus norvegicus
ENSRNOG00000004768
I
MYF5
Sorex araneus
ENSSARG00000008217
I
MYF5
Sus scrofa
ENSSSCG00000000937
I
MYF5
Tupaia belangeri
ENSTBEG00000008363
I
myf5
Tetraodon nigroviridis
ENSTNIG00000011406
I
myf5
Takifugu rubripes
ENSTRUG00000010781
I
MYF5
Tursiops truncatus
ENSTTRG00000014691
I
MYF5
Vicugna pacos
ENSVPAG00000001927
I
myf5
Xenopus tropicalis
XB-GENE-493550
I
myf5.L
Xenopus laevis
XB-GENE-866267
I
MYF6
Anolis carolinensis
ENSACAG00000022851
I
MYF6
Bos taurus
ENSBTAG00000014003
I
MYF6
Canis familiaris
ENSCAFG00000005805
I
MYF6
Callithrix jacchus
ENSCJAG00000019339
I
myf6
Danio rerio
ENSDARG00000029830
I
MYF6
Dasypus novemcinctus
ENSDNOG00000019387
I
Myf6
Dipodomys ordii
ENSDORG00000015435
I
MYF6
Equus caballus
ENSECAG00000018919
I
MYF6
Felis catus
ENSFCAG00000015010
I
MYF6
Homo sapiens
ENSG00000111046
D
myf6
Gasterosteus aculeatus
ENSGACG00000020008
I
MYF6
Gallus gallus
ENSGALG00000010936
I
MYF6
Gorilla gorilla
ENSGGOG00000004369
I
MYF6
Loxodonta africana
ENSLAFG00000016476
I
MYF6
Microcebus murinus
ENSMICG00000004274
I
MYF6
Myotis lucifugus
ENSMLUG00000004940
I
MYF6
Macaca mulatta
ENSMMUG00000011667
I
MYF6
Monodelphis domestica
ENSMODG00000020477
I
Myf6
Mus musculus
ENSMUSG00000035923
D
MYF6
Ornithorhynchus anatinus
ENSOANG00000004854
I
MYF6
Oryctolagus cuniculus
ENSOCUG00000001457
I
MYF6
Otolemur garnettii
ENSOGAG00000001038
I
MYF6
Ochotona princeps
ENSOPRG00000008999
I
myf6
Oryzias latipes
ENSORLG00000016261
I
MYF6
Procavia capensis
ENSPCAG00000001692
I
MYF6
Pan troglodytes
ENSPTRG00000005260
I
MYF6
Pteropus vampyrus
ENSPVAG00000003335
I
Myf6
Rattus norvegicus
ENSRNOG00000004878
I
MYF6
Sorex araneus
ENSSARG00000008211
I
MYF6
Sus scrofa
ENSSSCG00000026533
I
MYF6
Tupaia belangeri
ENSTBEG00000007822
I
MYF6
Taeniopygia guttata
ENSTGUG00000007751
I
myf6
Tetraodon nigroviridis
ENSTNIG00000011407
I
myf6
Takifugu rubripes
ENSTRUG00000010842
I
MYF6
Tursiops truncatus
ENSTTRG00000014689
I
MYF6
Vicugna pacos
ENSVPAG00000001926
I
myf6
Xenopus tropicalis
XB-GENE-998203
I
myf6.L
Xenopus laevis
XB-GENE-6252334
I
myf6.S
Xenopus laevis
XB-GENE-998208
I
myod1
Gasterosteus aculeatus
ENSGACG00000008444
I
myod1
Gasterosteus aculeatus
ENSGACG00000017350
I
myod1
Oryzias latipes
ENSORLG00000000694
I
myod1
Tetraodon nigroviridis
ENSTNIG00000002808
I
MYOG
Anolis carolinensis
ENSACAG00000004818
I
MYOG
Bos taurus
ENSBTAG00000006030
I
MYOG
Canis familiaris
ENSCAFG00000010309
I
MYOG
Callithrix jacchus
ENSCJAG00000006443
I
MYOG
Cavia porcellus
ENSCPOG00000023459
I
myog
Danio rerio
ENSDARG00000009438
I
MYOG
Dasypus novemcinctus
ENSDNOG00000032549
I
MYOG
Equus caballus
ENSECAG00000015955
I
MYOG
Erinaceus europaeus
ENSEEUG00000011702
I
MYOG
Echinops telfairi
ENSETEG00000003043
I
MYOG
Felis catus
ENSFCAG00000013108
I
MYOG
Homo sapiens
ENSG00000122180
D
myog
Gasterosteus aculeatus
ENSGACG00000000349
I
MYOG
Gallus gallus
ENSGALG00000000172
I
MYOG
Gorilla gorilla
ENSGGOG00000002115
I
MYOG
Loxodonta africana
ENSLAFG00000013113
I
MYOG
Meleagris gallopavo
ENSMGAG00000002212
I
MYOG
Myotis lucifugus
ENSMLUG00000016127
I
MYOG
Monodelphis domestica
ENSMODG00000001009
I
Myog
Mus musculus
ENSMUSG00000026459
D
MYOG
Ornithorhynchus anatinus
ENSOANG00000002107
I
MYOG
Oryctolagus cuniculus
ENSOCUG00000011548
I
MYOG
Otolemur garnettii
ENSOGAG00000029573
I
MYOG
Ochotona princeps
ENSOPRG00000014753
I
myog
Oryzias latipes
ENSORLG00000015906
I
MYOG
Procavia capensis
ENSPCAG00000006860
I
MYOG
Pan troglodytes
ENSPTRG00000001866
I
MYOG
Pteropus vampyrus
ENSPVAG00000013141
I
Myog
Rattus norvegicus
ENSRNOG00000030743
I
MYOG
Tupaia belangeri
ENSTBEG00000017364
I
MYOG
Taeniopygia guttata
ENSTGUG00000001380
I
myog
Tetraodon nigroviridis
ENSTNIG00000007278
I
myog
Takifugu rubripes
ENSTRUG00000001200
I
MYOG
Tursiops truncatus
ENSTTRG00000000710
I
MYOG
Vicugna pacos
ENSVPAG00000010566
I
myog
Xenopus tropicalis
XB-GENE-490105
I
myog.L
Xenopus laevis
XB-GENE-6252382
I
myog.S
Xenopus laevis
XB-GENE-865934
I
Myotis_brandtii_MYF5_10034131
Myotis brandtii
Myotis_brandtii_MYF5_10034131
I
Myotis_brandtii_MYF6_10034130
Myotis brandtii
Myotis_brandtii_MYF6_10034130
I
nRc.2.0.1.g24248
Romanomermis culicivorax
nRc.2.0.1.g24248
I
Ogr08795
Ophisaurus gracilis
Ogr08795
I
Pvit_10244
Pogona vitticeps
Pvit_10244
I
Pvit_15256
Pogona vitticeps
Pvit_15256
I
RPRC009735
Rhodnius prolixus
RPRC009735
I
Sakowv30008488m.g
Saccoglossus kowalevskii
Sakowv30008488m.g
I
SBAD_0001285401
Soboliphyme baturini
SBAD_0001285401
I
SPU_021119
Strongylocentrotus purpuratus
SPU_021119
I
TMUE_s0045001800
Trichuris muris
TMUE_s0045001800
I
TTRE_0000002701
Trichuris trichiura
TTRE_0000002701
I