CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORGLA03G0233800
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA03G0233800
T200947_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA03G0233800.1
GRAS
356
431
LRTLLINCAQAVSVSNHSLASDILKIIRHHASPTGDDSQRLALCLAYCLDVRLTGTGSQIYHKFITKRRNVKDILK
ORGLA03G0233800.1
GRAS
423
668
RRNVKDILKVHIIDFGICFGFQWPSLFEELAKIEDGPPKLRITGIELPESGFRPYARSNNIGLRLADYAKTFNIPFEYQHISSNKWEALSPEDFNIEKDEVLIVNCIYRMKDLGDETISINSARSRVLNTIRMMKPKVFVQGVLNGSYGVPFFLTRFKEVMYHYNSLFDMLDKNIPRDNETRMIIERDIYQYIMLNVIACEGPERIERPESYKKWKVRNLKAGLVQLPLNPAIVRETQDMSSDQAS
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
lsd1
Schizosaccharomyces pombe
SPBC146.09c
N
lsd2
Schizosaccharomyces pombe
SPAC23E2.02
N
PNEG_00396
Pneumocystis murina
PNEG_00396
N
PredSwiss_ASS2010_405.1
Pneumocystis carinii
PredSwiss_ASS2010_405.1
N
PredSwiss_CON4.1
Pneumocystis carinii
PredSwiss_CON4.1
N
SJAG_02401
Schizosaccharomyces japonicus
SJAG_02401
N
SOCG_02447
Schizosaccharomyces octosporus
SOCG_02447
N
SPOG_01553
Schizosaccharomyces cryophilus
SPOG_01553
N
SPOG_04221
Schizosaccharomyces cryophilus
SPOG_04221
N