CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PGSC0003DMG400012071
(
Solanum tuberosum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PGSC0003DMG400012071
T201119_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PGSC0003DMT400031475
GRAS
110
490
LVHLLMAAAEALTGVNKSRELARVILVRLKELASPNGATNMERLAAHFTDALQALLDGAASGTLHAKLMFSPNYKDEHHQGDVLAAFQLLQDMSPFVKFGHFTANQAIFESVTHDRRVHIVDYDIMEGIQWASLMQALVSRKDGPPTPHLRITALSRSGSGRRSFGTVQETGRRLTAFATSIGQPFSFHHCRLDSDEIFKPTNLKLVRGEALIINCMLHLPHFSYRASDSVASFLSGSKTLNPRLVTLVEEELRPIGDEEGFMGRFMDTLHHYSALYDSLEAGFPLQSRARALVERVFLGPRITGSLARIYRARGEEERCSWGEWLSGVGFCESNISFANHCQAKLLLGLFNDGYRVEEIGTNKLVLGWKSRRLLSASIWT
Links
Other
GRAS
family TFs
Other
Solanum tuberosum
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_05495
Capronia coronata
A1O1_05495
I
A1O3_09102
Capronia epimyces
A1O3_09102
I
A1O5_02864
Cladophialophora psammophila
A1O5_02864
I
A1O7_06785
Cladophialophora yegresii
A1O7_06785
I
A1O9_01381
Exophiala aquamarina
A1O9_01381
I
A1Q1_02234
Trichosporon asahii
A1Q1_02234
I
ACLA_072760
Aspergillus clavatus
CADACLAG00007067
I
ACRE_010220
Acremonium chrysogenum
ACRE_010220
I
AFUA_2G14720
Aspergillus fumigatus
CADAFUAG00004810
I
AMAG_13560
Allomyces macrogynus
AMAG_13560
I
AMAG_13812
Allomyces macrogynus
AMAG_13812
I
ANIA_07545
Aspergillus nidulans
CADANIAG00000651
I
ARB_03649
Arthroderma benhamiae
ARB_03649
I
ATEG_07814
Aspergillus terreus
CADATEAG00001961
I
AUEXF2481DRAFT_28704
Aureobasidium subglaciale
AUEXF2481DRAFT_28704
I
AWRI1499_3546
Brettanomyces bruxellensis
AWRI1499_3546
I
BAUCODRAFT_76416
Baudoinia compniacensis
BAUCODRAFT_76416
I
BBA_01157
Beauveria bassiana
BBA_01157
I
Bcin02g03320
Botrytis cinerea
Bcin02g03320
I
BGHDH14_bgh02253
Blumeria graminis
BGHDH14_bgh02253
I
BN946_scf184796.g4
Trametes cinnabarina
BN946_scf184796.g4
I
BOTBODRAFT_182611
Botryobasidium botryosum
BOTBODRAFT_182611
I
CADAFLAG00007032
Aspergillus flavus
CADAFLAG00007032
I
CADANGAG00012044
Aspergillus niger
CADANGAG00012044
I
CADAORAG00008808
Aspergillus oryzae
CADAORAG00008808
I
CC1G_07415
Coprinopsis cinerea
CC1G_07415
I
CCM_02243
Cordyceps militaris
CCM_02243
I
CERSUDRAFT_114103
Ceriporiopsis subvermispora
CERSUDRAFT_114103
I
CFIO01_03727
Colletotrichum fioriniae
CFIO01_03727
I
CGGC5_14765
Colletotrichum gloeosporioides
CGGC5_14765
I
CH063_08450
Colletotrichum higginsianum
CH063_08450
I
CHGG_05974
Chaetomium globosum
CHGG_05974
I
CIMG_12689
Coccidioides immitis
CIMG_12689
I
CMQ_1414
Grosmannia clavigera
CMQ_1414
I
CND03290
Cryptococcus neoformans
CND03290
I
Cob_12224
Colletotrichum orbiculare
Cob_12224
I
CPC735_040200
Coccidioides posadasii
CPC735_040200
I
CPUR_08669
Claviceps purpurea
CPUR_08669
I
CSUB01_09867
Colletotrichum sublineola
CSUB01_09867
I
CTHT_0003560
Chaetomium thermophilum
CTHT_0003560
I
CY34DRAFT_54046
Suillus luteus
CY34DRAFT_54046
I
DACRYDRAFT_48176
Dacryopinax sp
DACRYDRAFT_48176
I
DOTSEDRAFT_68866
Dothistroma septosporum
DOTSEDRAFT_68866
I
EDP44549.1
Malassezia globosa
EDP44549.1
I
EPUS_00857
Endocarpon pusillum
EPUS_00857
I
estExt_fgenesh1_pg.C_10706
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_10706
I
estExt_fgenesh1_pg.C_120063
Sporobolomyces roseus
estExt_fgenesh1_pg.C_120063
I
estExt_fgenesh1_pg.C_sca_1_chr1_3_00639
Nectria haematococca
estExt_fgenesh1_pg.C_sca_1_chr1_3_00639
I
estExt_fgenesh3_kg.C_40179
Neurospora discreta
estExt_fgenesh3_kg.C_40179
I
estExt_fgeneshPB_pg.C_250119
Phycomyces blakesleeanus
estExt_fgeneshPB_pg.C_250119
I
estExt_Genewise1Plus.C_140165
Cryphonectria parasitica
estExt_Genewise1Plus.C_140165
I
EURHEDRAFT_381770
Aspergillus ruber
EURHEDRAFT_381770
I
EV44_g4880
Erysiphe necator
EV44_g4880
I
F503_06796
Ophiostoma piceae uamh
F503_06796
I
FFUJ_00859
Fusarium fujikuroi
FFUJ_00859
I
fgenesh1_pg.00815_#_160
Aspergillus carbonarius
fgenesh1_pg.00815_#_160
I
fgenesh1_pm.C_chr_1000514
Mycosphaerella graminicola
fgenesh1_pm.C_chr_1000514
I
fgeneshMC_pg.10_#_374
Mucor circinelloides
fgeneshMC_pg.10_#_374
I
fgeneshMC_pg.11_#_166
Mucor circinelloides
fgeneshMC_pg.11_#_166
I
fgeneshPB_pg.4__282
Phycomyces blakesleeanus
fgeneshPB_pg.4__282
I
fgeneshTM_pg.1_#_1734
Tremella mesenterica
fgeneshTM_pg.1_#_1734
I
FGRRES_00352
Fusarium graminearum
FGRRES_00352
I
FIBRA_08626
Fibroporia radiculosa
FIBRA_08626
I
FOMPIDRAFT_1123646
Fomitopsis pinicola
FOMPIDRAFT_1123646
I
FOXG_00707
Fusarium oxysporum
FOXG_00707
I
FPSE_00010
Fusarium pseudograminearum
FPSE_00010
I
FVEG_00807
Fusarium verticillioides
FVEG_00807
I
G647_03321
Cladophialophora carrionii
G647_03321
I
GALMADRAFT_123329
Galerina marginata
GALMADRAFT_123329
I
GGTG_12878
Gaeumannomyces graminis
GGTG_12878
I
GLOINDRAFT_349601
Rhizophagus irregularis
GLOINDRAFT_349601
I
GLOTRDRAFT_21409
Gloeophyllum trabeum
GLOTRDRAFT_21409
I
GLRG_01314
Colletotrichum graminicola
GLRG_01314
I
GMDG_04517
Pseudogymnoascus destructans
GMDG_04517
I
GSTUM_00001625001
Tuber melanosporum
GSTUM_00001625001
I
gwh2.6.574.1
Phanerochaete chrysosporium
gwh2.6.574.1
I
H101_06169
Trichophyton interdigitale
H101_06169
I
H102_06780
Trichophyton rubrum
H102_06780
I
H105_06820
Trichophyton soudanense
H105_06820
I
HETIRDRAFT_248206
Heterobasidion irregulare
HETIRDRAFT_248206
I
HMPREF1120_07714
Exophiala dermatitidis
HMPREF1120_07714
I
HMPREF1541_08131
Cyphellophora europaea
HMPREF1541_08131
I
HMPREF1624_07645
Sporothrix schenckii
HMPREF1624_07645
I
J056_003714
Wallemia ichthyophaga
J056_003714
I
JAAARDRAFT_97747
Jaapia argillacea
JAAARDRAFT_97747
I
K437DRAFT_221438
Tilletiaria anomala
K437DRAFT_221438
N
K443DRAFT_676702
Laccaria amethystina
K443DRAFT_676702
I
L804_00322
Cryptococcus gattii
L804_00322
I
LELG_00868
Lodderomyces elongisporus
LELG_00868
I
M378DRAFT_52467
Amanita muscaria
M378DRAFT_52467
I
M404DRAFT_68462
Pisolithus tinctorius
M404DRAFT_68462
I
M407DRAFT_54328
Tulasnella calospora
M407DRAFT_54328
I
M408DRAFT_66182
Serendipita vermifera
M408DRAFT_66182
I
M413DRAFT_24434
Hebeloma cylindrosporum
M413DRAFT_24434
I
M437DRAFT_74372
Aureobasidium melanogenum
M437DRAFT_74372
I
M438DRAFT_358724
Aureobasidium pullulans
M438DRAFT_358724
I
MAC_08141
Metarhizium acridum
MAC_08141
I
MAJ_00916
Metarhizium majus
MAJ_00916
I
MAM_05750
Metarhizium album
MAM_05750
I
MANI_001834
Metarhizium anisopliae
MANI_001834
I
MAPG_00591
Magnaporthe poae
MAPG_00591
I
MBM_02278
Marssonina brunnea
MBM_02278
I
MBR_03191
Metarhizium brunneum
MBR_03191
I
MCYG_07480
Microsporum canis
MCYG_07480
I
MCYG_07480
Arthroderma otae
MCYG_07480
I
MDP0000183865
Malus domestica
MDP0000183865
I
MGG_00354
Magnaporthe oryzae
MGG_00354
I
MGU_03004
Metarhizium guizhouense
MGU_03004
I
MGYG_05253
Microsporum gypseum
MGYG_05253
I
Moror_8992
Moniliophthora roreri
Moror_8992
I
MPH_13782
Macrophomina phaseolina
MPH_13782
I
MSY001_2604
Malassezia sympodialis
MSY001_2604
I
MVLG_01455
Microbotryum violaceum
MVLG_01455
I
Mycgr3G83804
Zymoseptoria tritici
Mycgr3G83804
I
MYCTH_2297059
Myceliophthora thermophila
MYCTH_2297059
I
NCU03033
Neurospora crassa
NCU03033
I
NDAI_0I03200
Naumovozyma dairenensis
NDAI_0I03200
I
NechaG98863
Fusarium solani
NechaG98863
I
NEUTE1DRAFT_126747
Neurospora tetrasperma
NEUTE1DRAFT_126747
I
NFIA_089950
Neosartorya fischeri
CADNFIAG00007039
I
OIDMADRAFT_64370
Oidiodendron maius
OIDMADRAFT_64370
I
PaG_02568
Pseudozyma aphidis
PaG_02568
N
PAS_chr3_0766
Komagataella pastoris
PAS_chr3_0766
I
PAXRUDRAFT_147875
Paxillus rubicundulus
PAXRUDRAFT_147875
I
Pc12g01590
Penicillium chrysogenum
Pc12g01590
I
PCH_Pc12g01590
Penicillium rubens
PCH_Pc12g01590
I
PDE_06383
Penicillium oxalicum
PDE_06383
I
PDIP_02950
Penicillium digitatum
PDIP_02950
I
PEX1_081380
Penicillium expansum
PEX1_081380
I
PFICI_01568
Pestalotiopsis fici
PFICI_01568
I
PFL1_05889
Pseudozyma flocculosa
PFL1_05889
I
PHACADRAFT_54766
Phanerochaete carnosa
PHACADRAFT_54766
I
PHLGIDRAFT_43379
Phlebiopsis gigantea
PHLGIDRAFT_43379
I
php2
Schizosaccharomyces pombe
SPBC725.11c
I
PIIN_00087
Piriformospora indica
PIIN_00087
I
PILCRDRAFT_824094
Piloderma croceum
PILCRDRAFT_824094
I
PISMIDRAFT_40699
Pisolithus microcarpus
PISMIDRAFT_40699
I
PITC_020830
Penicillium italicum
PITC_020830
I
PLEOSDRAFT_1027012
Pleurotus ostreatus
PLEOSDRAFT_1027012
I
PMAA_100650
Talaromyces marneffei
PMAA_100650
I
PMAA_100650
Penicillium marneffei
PMAA_100650
I
PODANS_1_17860
Podospora anserina
PODANS_1_17860
I
POPTR_0016s05440
Populus trichocarpa
POPTR_0016s05440
I
POSPLDRAFT_42451
Postia placenta
POSPLDRAFT_42451
I
PSEUBRA_SCAF2g02687
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02687
N
PV04_07209
Capronia semiimmersa
PV04_07209
I
PV05_09594
Exophiala xenobiotica
PV05_09594
I
PV06_05449
Exophiala oligosperma
PV06_05449
I
PV07_10918
Cladophialophora immunda
PV07_10918
I
PV08_01898
Exophiala spinifera
PV08_01898
I
PV09_04933
Verruconis gallopava
PV09_04933
I
PV10_06645
Exophiala mesophila
PV10_06645
I
PV11_09254
Exophiala sideris
PV11_09254
I
PVAR5_8453
Byssochlamys spectabilis
PVAR5_8453
I
RHTO_00634
Rhodosporidium toruloides
RHTO_00634
I
RO3G_00980
Rhizopus oryzae
RO3G_00980
I
RO3G_16178
Rhizopus oryzae
RO3G_16178
I
RTG_01693
Rhodotorula glutinis
RTG_01693
I
S40285_00742
Stachybotrys chlorohalonata
S40285_00742
I
S40288_04573
Stachybotrys chartarum
S40288_04573
I
SBOR_3412
Sclerotinia borealis
SBOR_3412
I
SCHCODRAFT_110229
Schizophyllum commune
SCHCODRAFT_110229
I
SCLCIDRAFT_62922
Scleroderma citrinum
SCLCIDRAFT_62922
I
SEPMUDRAFT_121871
Sphaerulina musiva
SEPMUDRAFT_121871
I
SERLA73DRAFT_72938
Serpula lacrymans
SERLA73DRAFT_72938
I
SJAG_00698
Schizosaccharomyces japonicus
SJAG_00698
I
SMAC_00418
Sordaria macrospora
SMAC_00418
I
SOCG_03424
Schizosaccharomyces octosporus
SOCG_03424
I
SPBR_07722
Sporothrix brasiliensis
SPBR_07722
I
SPOG_04316
Schizosaccharomyces cryophilus
SPOG_04316
I
SPPG_06102
Spizellomyces punctatus
SPPG_06102
I
sr12660
Sporisorium reilianum
sr12660
N
SS1G_01725
Sclerotinia sclerotiorum
SS1G_01725
I
THITE_2112524
Thielavia terrestris
THITE_2112524
I
TPHA_0A05980
Tetrapisispora phaffii
TPHA_0A05980
I
TRIATDRAFT_259021
Trichoderma atroviride
TRIATDRAFT_259021
I
TRIREDRAFT_124286
Trichoderma reesei
TRIREDRAFT_124286
I
TRIVIDRAFT_175433
Trichoderma virens
TRIVIDRAFT_175433
I
TRV_01971
Trichophyton verrucosum
TRV_01971
I
TSTA_057980
Talaromyces stipitatus
TSTA_057980
I
U727_00431281391
Penicillium solitum
U727_00431281391
I
UCRNP2_3187
Neofusicoccum parvum
UCRNP2_3187
I
UCRPA7_4038
Togninia minima
UCRPA7_4038
I
UHOR_02364
Ustilago hordei
UHOR_02364
N
UM01597
Ustilago maydis
UM01597
N
UREG_01379
Uncinocarpus reesii
UREG_01379
I
UV8b_4419
Ustilaginoidea virens
UV8b_4419
I
V499_07378
Pseudogymnoascus pannorum
V499_07378
I
V565_064680
Rhizoctonia solani
V565_064680
I
VDBG_05896
Verticillium albo atrum
VDBG_05896
I
VDBG_05896
Verticillium alfalfae
VDBG_05896
I
VHEMI02644
Torrubiella hemipterigena
VHEMI02644
I
W97_01249
Coniosporium apollinis
W97_01249
I
WALSEDRAFT_57633
Wallemia sebi
WALSEDRAFT_57633
I
X797_004191
Metarhizium robertsii
X797_004191
I
XP_002492996.1
Pichia pastoris
XP_002492996.1
I
Z517_09964
Fonsecaea pedrosoi
Z517_09964
I
Z518_09077
Rhinocladiella mackenziei
Z518_09077
I
Z519_07395
Cladophialophora bantiana
Z519_07395
I
ZBAI_03607
Zygosaccharomyces bailii
ZBAI_03607
I
ZBAI_09292
Zygosaccharomyces bailii
ZBAI_09292
I