POPTR_0001s44090 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0001s44090 T201172_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0001s44090.1 GRAS 213 583

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00043p00136400 Amborella trichopoda AMTR_s00043p00136400 N 0.744
Aquca_005_00404 Aquilegia coerulea Aquca_005_00404 N 0.794
BGIOSGA025902 Oryza indica BGIOSGA025902 N 0.737
BRADI1G25370 Brachypodium distachyon BRADI1G25370 N 0.745
cassava24578.valid.m1 Manihot esculenta cassava24578.valid.m1 N 0.851
Ca_06943 Cicer arietinum Ca_06943 N 0.829
Ciclev10007843m.g Citrus clementina Ciclev10007843m.g N 0.843
CIGR1 Oryza sativa OS07G0545800 N 0.734
Cucsa.053270 Cucumis sativus Cucsa.053270 N 0.816
Eucgr.F03414 Eucalyptus grandis Eucgr.F03414 N 0.837
evm.TU.supercontig_3097.1 Carica papaya evm.TU.supercontig_3097.1 N 0.815
F775_07373 Aegilops tauschii F775_07373 N 0.737
gene03285-v1.0-hybrid Fragaria vesca gene03285-v1.0-hybrid N 0.856
GLYMA06G41500 Glycine max GLYMA06G41500 N 0.840
GLYMA12G16750 Glycine max GLYMA12G16750 N 0.818
GLYMA12G34420 Glycine max GLYMA12G34420 N 0.821
GLYMA13G36120 Glycine max GLYMA13G36120 N 0.816
Gorai.002G080600 Gossypium raimondii Gorai.002G080600 N 0.837
Gorai.009G427800 Gossypium raimondii Gorai.009G427800 N 0.808
Gorai.013G164700 Gossypium raimondii Gorai.013G164700 N 0.835
GRMZM5G821439 Zea mays GRMZM5G821439 N 0.746
GSMUA_Achr6G24310_001 Musa acuminata GSMUA_Achr6G24310_001 N 0.737
GSMUA_Achr8G03610_001 Musa acuminata GSMUA_Achr8G03610_001 N 0.771
LjSGA_123909.1 Lotus japonicus LjSGA_123909.1 N 0.814
Lus10035840.g Linum usitatissimum Lus10035840.g N 0.843
Lus10036623.g Linum usitatissimum Lus10036623.g N 0.829
MDP0000205622 Malus domestica MDP0000205622 N 0.870
mgf007614m Mimulus guttatus mgf007614m N 0.843
MLOC_37712 Hordeum vulgare MLOC_37712 N 0.751
MTR_2g082090 Medicago truncatula MTR_2g082090 N 0.824
OB07G23640 Oryza brachyantha OB07G23640 N 0.745
OBART07G17780 Oryza barthii OBART07G17780 N 0.734
OGLUM07G17420 Oryza glumaepatula OGLUM07G17420 N 0.737
OLONG_024541 Oryza longistaminata OLONG_024541 N 0.737
OMERI07G14660 Oryza meridionalis OMERI07G14660 N 0.734
ONIVA07G16090 Oryza nivara ONIVA07G16090 N 0.737
OPUNC07G16570 Oryza punctata OPUNC07G16570 N 0.745
orange1.1g040563m.g Citrus sinensis orange1.1g040563m.g N 0.812
ORGLA07G0142600 Oryza glaberrima ORGLA07G0142600 N 0.734
ORUFI07G18480 Oryza rufipogon ORUFI07G18480 N 0.737
Pavir.Bb02923 Panicum virgatum Pavir.Bb02923 N 0.741
Pavir.J35699 Panicum virgatum Pavir.J35699 N 0.741
PDK_20s1421311g003 Phoenix dactylifera PDK_20s1421311g003 N 0.808
PGSC0003DMG400019232 Solanum tuberosum PGSC0003DMG400019232 N 0.832
PGSC0003DMG400021802 Solanum tuberosum PGSC0003DMG400021802 N 0.840
PK07026.1 Cannabis sativa PK07026.1 N 0.829
Pm029452 Prunus mume Pm029452 N 0.870
POPTR_0011s13460 Populus trichocarpa POPTR_0011s13460 N 0.902
PRUPE_ppa003323mg Prunus persica PRUPE_ppa003323mg N 0.881
SapurV1A.0327s0070 Salix purpurea SapurV1A.0327s0070 N 0.886
SapurV1A.0664s0120 Salix purpurea SapurV1A.0664s0120 N 0.953
SapurV1A.3085s0020 Salix purpurea SapurV1A.3085s0020 N 0.955
Sb02g035680 Sorghum bicolor Sb02g035680 N 0.732
Si029156m.g Setaria italica Si029156m.g N 0.743
Solyc07g063940.1 Solanum lycopersicum Solyc07g063940.1 N 0.835
Solyc12g005340.1 Solanum lycopersicum Solyc12g005340.1 N 0.840
TCM_031132 Theobroma cacao TCM_031132 N 0.846
Traes_2AS_620B821281 Triticum aestivum Traes_2AS_620B821281 N 0.734
Traes_2BS_4600D4B54 Triticum aestivum Traes_2BS_4600D4B54 N 0.745
Traes_2DS_2D035BAFD Triticum aestivum Traes_2DS_2D035BAFD N 0.737
TRIUR3_35245 Triticum urartu TRIUR3_35245 N 0.737
VIT_19s0014g04940 Vitis vinifera VIT_19s0014g04940 N 0.843