CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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POPTR_0004s07700
(
Populus trichocarpa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
POPTR_0004s07700
T201187_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
POPTR_0004s07700.1
GRAS
263
640
SKQTVIEAASAIYEGKTDVYTEILTRVSLVSSPGGNSEQRLIEYMLMALKSRLNSSENTTSVMELYSKEHVDATQLLYDLSPCFKLGFMAANLAIIDATREQEQEANTSSNGFHVVDFDIGHGGQYKNLLHALSGLQNSKPAIVKITAVAADSNGVEEERLRLVGETLTQLARRVGLNLCFNVVSCKLSELTRESLGCEPDEALAVNFAFKLYRMPDESVSSTENPRDELLRRVKGLAPRVVTVVEQEMNTNTAPFMARVNESCSYYGALFDSIESTVKGDNSERAKVEEGLGRRMVNSVACEGRDRVERCEVFGKWRARMGMAGFELKPLSHNIAESMKTRLSLANRVNPGFSVKEENGGVCFGWMGKTLTVASAWR
Links
Other
GRAS
family TFs
Other
Populus trichocarpa
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_213705
Agaricus bisporus
AGABI2DRAFT_213705
N
BN946_scf184935.g38
Trametes cinnabarina
BN946_scf184935.g38
N
CC1G_01816
Coprinopsis cinerea
CC1G_01816
N
CERSUDRAFT_129101
Ceriporiopsis subvermispora
CERSUDRAFT_129101
N
CY34DRAFT_111437
Suillus luteus
CY34DRAFT_111437
N
e_gw1.1.1937.1
Heterobasidion annosum
e_gw1.1.1937.1
N
FIBRA_06633
Fibroporia radiculosa
FIBRA_06633
N
FOMPIDRAFT_1085187
Fomitopsis pinicola
FOMPIDRAFT_1085187
N
GALMADRAFT_52019
Galerina marginata
GALMADRAFT_52019
N
GLOTRDRAFT_67965
Gloeophyllum trabeum
GLOTRDRAFT_67965
N
JAAARDRAFT_120662
Jaapia argillacea
JAAARDRAFT_120662
N
K443DRAFT_188303
Laccaria amethystina
K443DRAFT_188303
N
LACBIDRAFT_301089
Laccaria bicolor
LACBIDRAFT_301089
N
M378DRAFT_183062
Amanita muscaria
M378DRAFT_183062
N
M404DRAFT_133724
Pisolithus tinctorius
M404DRAFT_133724
N
M413DRAFT_22382
Hebeloma cylindrosporum
M413DRAFT_22382
N
Moror_8325
Moniliophthora roreri
Moror_8325
N
PAXRUDRAFT_820983
Paxillus rubicundulus
PAXRUDRAFT_820983
N
PHACADRAFT_204514
Phanerochaete carnosa
PHACADRAFT_204514
N
PHLGIDRAFT_125788
Phlebiopsis gigantea
PHLGIDRAFT_125788
N
PILCRDRAFT_813612
Piloderma croceum
PILCRDRAFT_813612
N
PISMIDRAFT_671262
Pisolithus microcarpus
PISMIDRAFT_671262
N
PLEOSDRAFT_1035655
Pleurotus ostreatus
PLEOSDRAFT_1035655
N
SCHCODRAFT_104325
Schizophyllum commune
SCHCODRAFT_104325
N
SCLCIDRAFT_1207480
Scleroderma citrinum
SCLCIDRAFT_1207480
N
SERLA73DRAFT_44621
Serpula lacrymans
SERLA73DRAFT_44621
N