CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si012318m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si012318m.g
T201498_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si012318m
GRAS
186
559
LSTLLIRCAQAVDRSNYLIGGELLNQIKQHASTTGDAMQRLAQCFSKGLQARLMGTGKQLRNLLIADRPSAMEFLKAYNLYMSACYFNKVAHIFSALTIAQVMKGKSRLHIVGYGIHGAFQWAGLIRWLAKREGGPPLGMKITTICCSHPESFPVQWIEEQGYRLSKYASELGLPFVFEVVTAEREKVCIQNLNVDADEVLVVSDLFNLSTLKDESIFFDSPNPRDTVLSNIKKMRPNVFIQSVLNCSNGSCFLSRFRQKLFYYSALFDMLDAIVPRESEPRSVLEQELLGRYVLNAIACEGIDLAQHPEKYRQWQSRNQRAGLRQLPLRPVVVNVLKDKVKKHHHKDLLLSEEGQWLLQGWKGRVLFAHSTWV
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
2 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30178.m000862
Ricinus communis
30178.m000862
N
cassava19692.m1
Manihot esculenta
cassava19692.m1
N
cassava27410.m1
Manihot esculenta
cassava27410.m1
N
cassava41407.m1
Manihot esculenta
cassava41407.m1
N
Ciclev10016736m.g
Citrus clementina
Ciclev10016736m.g
N
Cla011016
Citrullus lanatus
Cla011016
N
Cucsa.094760
Cucumis sativus
Cucsa.094760
N
evm.TU.supercontig_8.51
Carica papaya
evm.TU.supercontig_8.51
N
evm.TU.supercontig_9.294
Carica papaya
evm.TU.supercontig_9.294
N
GLYMA13G41920
Glycine max
GLYMA13G41920
N
GLYMA15G03470
Glycine max
GLYMA15G03470
N
Gorai.N002500
Gossypium raimondii
Gorai.N002500
N
MDP0000846736
Malus domestica
MDP0000846736
N
MTR_2g098880
Medicago truncatula
MTR_2g098880
N
Pm022169
Prunus mume
Pm022169
N
POPTR_0002s24030
Populus trichocarpa
POPTR_0002s24030
N
POPTR_0007s01940
Populus trichocarpa
POPTR_0007s01940
N
PRUPE_ppa010254mg
Prunus persica
PRUPE_ppa010254mg
N
SapurV1A.0071s0650
Salix purpurea
SapurV1A.0071s0650
N
SapurV1A.0834s0150
Salix purpurea
SapurV1A.0834s0150
N
TCM_002654
Theobroma cacao
TCM_002654
N
TCM_020030
Theobroma cacao
TCM_020030
N
VIT_00s0174g00140
Vitis vinifera
VIT_00s0174g00140
N
VIT_05s0102g00410
Vitis vinifera
VIT_05s0102g00410
N