CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_5AL_4C72C5BCB
(
Triticum aestivum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Traes_5AL_4C72C5BCB
T201735_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_5AL_4C72C5BCB.1
GRAS
57
426
LKQVIIACGKAAAENDIHTEVLISELRQLVSISGDPMQRLGAYMLEGLVARLSFSGSKLYKSLKCKEPTSSELISHMHHLCEICPFYRFSYMSANGAIAEAIKSENFVHIIDFHIAQGSQWITIIEALAARSGGPPCLRITGIDDSNSAYARGGGLDMVGTRLHSVSASCGMPFEFNAVHAASHEVYLEHLDIRPGEVIVVNFAYELHHTPDESVSTENHRNRIIRMIKSLSPRVVTLVEQESNTNTAPFFSRYLETFEYYTAMFESIDVARPRDDKRRISTEQHCLARDVINLIACEGAERVERLEAFGKWKARFAMAGFRPYPLSSLVNNTIKTLLDNYHSCYRLEERDGVLYLGWKSRVLVVSSAWC
Links
Other
GRAS
family TFs
Other
Triticum aestivum
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
N
0.000
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
N
0.000
maker-nMf.1.1.scaf01969-augustus-gene-0.11
Meloidogyne floridensis
maker-nMf.1.1.scaf01969-augustus-gene-0.11
N
0.000
maker-nMf.1.1.scaf06196-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06196-snap-gene-0.8
N
0.000
maker-nMf.1.1.scaf08255-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08255-snap-gene-0.4
N
0.000
maker-nMf.1.1.scaf11763-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf11763-augustus-gene-0.3
N
0.000
maker-nMf.1.1.scaf15444-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf15444-snap-gene-0.4
N
0.000
MhA1_Contig1386.frz3.gene10
Meloidogyne hapla
MhA1_Contig1386.frz3.gene10
N
0.000
MhA1_Contig2339.frz3.gene1
Meloidogyne hapla
MhA1_Contig2339.frz3.gene1
N
0.000
MhA1_Contig2339.frz3.gene2
Meloidogyne hapla
MhA1_Contig2339.frz3.gene2
N
0.000
MhA1_Contig41.frz3.gene12
Meloidogyne hapla
MhA1_Contig41.frz3.gene12
N
0.000
MhA1_Contig790.frz3.gene2
Meloidogyne hapla
MhA1_Contig790.frz3.gene2
N
0.000
MhA1_Contig790.frz3.gene5
Meloidogyne hapla
MhA1_Contig790.frz3.gene5
N
0.000
Minc04725
Meloidogyne incognita
Minc04725
N
0.000
Minc13321
Meloidogyne incognita
Minc13321
N
0.000
Minc13448
Meloidogyne incognita
Minc13448
N
0.000
Minc17464
Meloidogyne incognita
Minc17464
N
0.000
Minc18661
Meloidogyne incognita
Minc18661
N
0.000
Minc18991
Meloidogyne incognita
Minc18991
N
0.000