CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla012500
(
Citrullus lanatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cla012500
T201922_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla012500
GRAS
154
518
LVHMLVTCADSIHRGDFPLAGSLIVEMQSLLSGINSECGIGKVAGYFIDALTRRVFTPHDTTTATTGYEDVLLYHHYYEACPYLKFAHFTANQAILEAFDGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPLLRLTGIGPPSPDGHDSLREIGLRLAELARSVNVRFAFRGVAAARLEDVKPWMLQVSPKETVAVNSVMQLHRLLGNNPSSSAMEMVLGWIRSLNPKIMTVVEQEADHNQTGFLERVTEALALFYYSTMFDSLEACCMMPEKALAEMYLQREICNVVSCEGSARVERHEPLVKWRSRLRQAGFRALHLGSNAFKQASMLLTLFSAEGFSIEENEGCLTLGWHSRPLIAASAWQ
Links
Other
GRAS
family TFs
Other
Citrullus lanatus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LjSGA_080382.1
Lotus japonicus
LjSGA_080382.1
N
SapurV1A.0048s0510
Salix purpurea
SapurV1A.0048s0510
N
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
SapurV1A.2807s0020
Salix purpurea
SapurV1A.2807s0020
N
Thhalv10026038m.g
Eutrema salsugineum
Thhalv10026038m.g
N
ULT1
Arabidopsis thaliana
AT4G28190
N