CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pm012190
(
Prunus mume
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pm012190
T201965_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pm012190
GRAS
46
468
LIHLLLTCANHVATGSLENANVALEQISQLASADGDTMQRIAAYFTEALADRILKAWPGLHRALNSTKISLVSEEFLVRKVFFEMLPFLKVAFVLANQAITEAMEGEKMVHVIDLNAAEPAQWIALLQVLSARPEGPPHLRITGVHQQKEVLDQMAHRLTEEAEKLDIPFQFCPIVSKLENLDMEKLRIKTGEALAISSVLQLHSLLASDDELLKKKSPLASKSSSGIPLPRVLQMNQGTLGELLEKEMGNGYSASPDSTSSSPLSLTASMKLDSFLNAFWSLTPKVMVITEQDSNHNGSTLMERLLEALYSYAALFDCLESTMSRNSIERLKVEKMLFGEEIKNIIACEGCERKERHEKLEKWIQRLDLAGFGNVPLSYYGMLQAKRLLQGYGCDGYRMREENGCVLISWQDRPLFSVSAWR
Links
Other
GRAS
family TFs
Other
Prunus mume
TFs
71 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008738
Calypte anna
Aan_R008738
N
0.000
Aan_R010551
Calypte anna
Aan_R010551
N
0.000
Afo_R010661
Aptenodytes forsteri
Afo_R010661
N
0.000
Afo_R015981
Aptenodytes forsteri
Afo_R015981
N
0.000
ahr
Xenopus tropicalis
XB-GENE-983107
N
0.000
ahr.S
Xenopus laevis
XB-GENE-983111
N
0.000
ahr2
Danio rerio
ENSDARG00000021833
N
0.000
ahr2
Gasterosteus aculeatus
ENSGACG00000008466
N
0.000
ahr2
Tetraodon nigroviridis
ENSTNIG00000017165
N
0.000
ahr2a
Takifugu rubripes
ENSTRUG00000009303
N
0.000
AHRR
Anolis carolinensis
ENSACAG00000008710
N
0.000
AHRR
Callithrix jacchus
ENSCJAG00000017613
N
0.000
AHRR
Monodelphis domestica
ENSMODG00000000638
N
0.000
ENSAPLG00000003921
Anas platyrhynchos
ENSAPLG00000003921
N
0.000
ENSFALG00000003870
Ficedula albicollis
ENSFALG00000003870
N
0.000
ENSFALG00000004883
Ficedula albicollis
ENSFALG00000004883
N
0.000
ENSGALG00000023742
Gallus gallus
ENSGALG00000023742
N
0.000
ENSOCUG00000028055
Oryctolagus cuniculus
ENSOCUG00000028055
N
0.000
ENSONIG00000010232
Oreochromis niloticus
ENSONIG00000010232
N
0.000
ENSORLG00000018196
Oryzias latipes
ENSORLG00000018196
N
0.000
Gfo_R006189
Geospiza fortis
Gfo_R006189
N
0.000
Gfo_R012068
Geospiza fortis
Gfo_R012068
N
0.000
JC7993
Xenopus laevis
JC7993
N
0.000