CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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cassava40518.m1
(
Manihot esculenta
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
cassava40518.m1
T202097_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
cassava40518.m1
GRAS
204
574
LAELLLASAEKVSNQQFDRARTLLNQCDHLSSSTGNAVERVVHYFSKALGERIDRETGKMTSQGLGKQQLFNIDEAIMAPTPNILASYQEVPFSQVAHFAGTQAVLENVAEAKRIHVIDLGIRIGVQWTGLMQALVSQSDFSLELLKITAIGTTLKQVIEDTGKRLTSFADSIGLPFSFKIVMVSDILELKEDLFELDADETVVVYCEYLLRSLIPLPDRLDSMMKVIRTLNPTIMVVTEPQFNCTSPYFVNRFIESLFYFSAYFDCLESCMGDDPNRMIVESLHFGEGIRNIVTTEGEERKIQNATLEVWRAFFARFGMEETEMSTSSLYLAELIARKFACGRACTLDLDGKSLLIGWKGTAMHSLSAWK
Links
Other
GRAS
family TFs
Other
Manihot esculenta
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA025100
Oryza indica
BGIOSGA025100
N
OB07G11800
Oryza brachyantha
OB07G11800
N
OBART07G02190
Oryza barthii
OBART07G02190
N
OGLUM07G14530
Oryza glumaepatula
OGLUM07G14530
N
OLONG_025097
Oryza longistaminata
OLONG_025097
N
ONIVA03G12000
Oryza nivara
ONIVA03G12000
N
OPUNC07G02060
Oryza punctata
OPUNC07G02060
N
ORGLA07G0019400
Oryza glaberrima
ORGLA07G0019400
N
ORUFI07G02010
Oryza rufipogon
ORUFI07G02010
N