CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA025100
(
Oryza indica
)
MADS box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00319 (SRF-TF)
IPR002100
BGIOSGA025100
T253014_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA025100-PA
MADS box
12
58
YIEEDRDRSLTLSKRRDGLFKLANDLSLLTDASVAICLHDSNKAQFF
Links
Other
MADS box
family TFs
Other
Oryza indica
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA03G12000
Oryza nivara
ONIVA03G12000
N
1.000
ORUFI07G02010
Oryza rufipogon
ORUFI07G02010
N
1.000
OBART07G02190
Oryza barthii
OBART07G02190
N
0.979
OGLUM07G14530
Oryza glumaepatula
OGLUM07G14530
N
0.979
OLONG_025097
Oryza longistaminata
OLONG_025097
N
0.979
OPUNC07G02060
Oryza punctata
OPUNC07G02060
N
0.979
ORGLA07G0019400
Oryza glaberrima
ORGLA07G0019400
N
0.979
LPERR07G02100
Leersia perrieri
LPERR07G02100
N
0.809
OB07G11800
Oryza brachyantha
OB07G11800
N
0.723