CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cagra.0239s0069
(
Capsella grandiflora
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cagra.0239s0069
T202308_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cagra.0239s0069.1.p
GRAS
265
635
IIEQLFNAAELIGTTGNTNGDHTVLAQGILARLNHHLNSNHKSPFQRAASHIAEALLSLIHNDSSPPPLITPENLILRIAAYRSFSETSPFLQFVNFTANQSILESCNDSGFDRIHIIDFDVGYGGQWSSLMQELASGGGGRRRNRASSLKLTVFAPPPSTVSDEFELRFTEENLKTFAGEVKIPFEVELLSIELLLNPAYWPLSLRSSEKEAIAVNLPINSVVPGYLPLILRFLKQISPNVVVCSDRGCDRNDAPFPNAVIHALQYHTTLLESLDANQNQDDSSIERFWVQPSIEKLLMKRHRWIERSHPWRSLITQCGFSPASLSQTAEAQAECLLQRNPVRGFHVEKRQSSLVMCWQRKELVTVSAWK
Links
Other
GRAS
family TFs
Other
Capsella grandiflora
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R005913
Calypte anna
Aan_R005913
I
Afo_R003314
Aptenodytes forsteri
Afo_R003314
I
Alligator_sinensis_CCG011591.1
Alligator sinensis
Alligator_sinensis_CCG011591.1
I
Brh_R011663
Buceros rhinoceros
Brh_R011663
I
ENSAPLG00000007967
Anas platyrhynchos
ENSAPLG00000007967
I
ENSBTAP00000003221-D1
Bos grunniens
ENSBTAP00000003221-D1
I
ENSCPOG00000027139
Cavia porcellus
ENSCPOG00000027139
I
ENSCSAG00000000715
Chlorocebus sabaeus
ENSCSAG00000000715
I
ENSMEUG00000013913
Macropus eugenii
ENSMEUG00000013913
I
ENSMMUG00000014688
Macaca mulatta
ENSMMUG00000014688
I
ENSOARG00000018071
Ovis aries
ENSOARG00000018071
I
ENSPANG00000022730
Papio anubis
ENSPANG00000022730
I
ENSSHAG00000014397
Sarcophilus harrisii
ENSSHAG00000014397
I
HES5
Bos taurus
ENSBTAG00000002483
I
HES5
Tursiops truncatus
ENSTTRG00000003782
I
Hes5
Rattus norvegicus
ENSRNOG00000013850
I
HES5
Pan troglodytes
ENSPTRG00000024233
I
HES5
Procavia capensis
ENSPCAG00000001025
I
HES5
Otolemur garnettii
ENSOGAG00000030950
I
Hes5
Mus musculus
ENSMUSG00000048001
D
HES5
Monodelphis domestica
ENSMODG00000008212
I
HES5
Meleagris gallopavo
ENSMGAG00000002009
I
HES5
Gorilla gorilla
ENSGGOG00000010276
I
HES5
Gallus gallus
ENSGALG00000001141
I
HES5
Homo sapiens
ENSG00000197921
D
HES5
Erinaceus europaeus
ENSEEUG00000008377
I
HES5
Callithrix jacchus
ENSCJAG00000002549
I
Tal_R007855
Tyto alba
Tal_R007855
I