Cagra.2098s0043 (Capsella grandiflora)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cagra.2098s0043 T202324_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.889 0.889
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.2098s0043.1.p GRAS 185 545

Links

Other GRAS family TFs
Other Capsella grandiflora TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AT2G46040 Arabidopsis thaliana AT2G46040 N 0.000
BGIOSGA015617 Oryza indica BGIOSGA015617 N 0.000
Bra039294 Brassica rapa Bra039294 N 0.000
BRADI5G00630 Brachypodium distachyon BRADI5G00630 N 0.000
F775_04400 Aegilops tauschii F775_04400 N 0.000
GRMZM2G424651 Zea mays GRMZM2G424651 N 0.000
LPERR04G01540 Leersia perrieri LPERR04G01540 N 0.000
LPERR10G08380 Leersia perrieri LPERR10G08380 N 0.000
MDP0000470728 Malus domestica MDP0000470728 N 0.000
MLOC_12524 Hordeum vulgare MLOC_12524 N 0.000
OB04G11920 Oryza brachyantha OB04G11920 N 0.000
OB10G19040 Oryza brachyantha OB10G19040 N 0.000
OGLUM04G01970 Oryza glumaepatula OGLUM04G01970 N 0.000
OMERI04G02470 Oryza meridionalis OMERI04G02470 N 0.000
ONIVA08G18490 Oryza nivara ONIVA08G18490 N 0.000
OPUNC04G02270 Oryza punctata OPUNC04G02270 N 0.000
ORUFI04G03050 Oryza rufipogon ORUFI04G03050 N 0.000
OS04G0166400 Oryza sativa OS04G0166400 N 0.000
Pavir.J12660 Panicum virgatum Pavir.J12660 N 0.000
Sb06g001680 Sorghum bicolor Sb06g001680 N 0.000
Si012339m.g Setaria italica Si012339m.g N 0.000
Si038535m.g Setaria italica Si038535m.g N 0.000
Traes_2BS_1E88E202F Triticum aestivum Traes_2BS_1E88E202F N 0.000