CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10004502m.g
(
Citrus clementina
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Ciclev10004502m.g
T202377_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10004502m
GRAS
284
659
SKQTVIEAATAVSEGKYDVASEILTRLSQATNSKGNSEQRLMEHMCSALKSRVNPHENPPPVAELFGKEHAESTQLLYDFSPCFSLGFMAANLAILEATMEQTTGNTIGSNKIHVIDFDIGQGGQYMNLFHALSARLNGKPAIVKVTAVADGTASEEKLKAVRDKLSQVAERVGVCLRFNVAICLKFDDLSRDSLGCEPDETLAVNFAFKLFRMPDESVSTENPRDELLRRVKGLSPSVVTLVEQETNTNTAPFMARVNEACAYYGALFDSIESTVLRDHSDRVKVEEGLSRKLANSVACEGRDRVERCEVFGKWRARMRMAGFELKPMSQIIAESMRTRLSSGNRVNPGFTVKEENGGICFGWMGRTLTVVSAWR
Links
Other
GRAS
family TFs
Other
Citrus clementina
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AALB005452
Anopheles albimanus
AALB005452
I
BGIBMGA011254
Bombyx mori
BGIBMGA011254
I
CAD25867
Encephalitozoon cuniculi
CAD25867
I
CAGL0H02959g
Candida glabrata
CAGL0H02959g
D
DACRYDRAFT_15039
Dacryopinax sp
DACRYDRAFT_15039
I
DAPPUDRAFT_314795
Daphnia pulex
DAPPUDRAFT_314795
I
DI09_143p10
Microsporidia sp
DI09_143p10
I
EHEL_101500
Encephalitozoon hellem
EHEL_101500
I
Eint_101430
Encephalitozoon intestinalis
Eint_101430
I
EROM_101370
Encephalitozoon romaleae
EROM_101370
I
fgenesh1_pg.scaffold_2000153
Monosiga brevicollis
fgenesh1_pg.scaffold_2000153
N
HMEL005588
Heliconius melpomene
HMEL005588
I
KGM_17297
Danaus plexippus
KGM_17297
I
LOAG_18791
Loa loa
LOAG_18791
N
meis1.S
Xenopus laevis
XB-GENE-479443
I
ML22078a
Mnemiopsis leidyi
ML22078a
I
NEPG_00487
Nematocida parisii ertm1
NEPG_00487
I
PV09_04248
Verruconis gallopava
PV09_04248
I
tetur26g01270
Tetranychus urticae
tetur26g01270
I
TriadG9468
Trichoplax adhaerens
TriadG9468
I
VICG_02118
Vittaforma corneae
VICG_02118
I