CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G130400
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.003G130400
T202611_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G130400.1
GRAS
264
635
LWSLLTQCAQAVAINDQRTANELLKQISQNSSTTGDGTQRFANYFADALTTRLAGMGAPSYSPLVSNRTSAADILKAYRVLVLACPFKKMMHFYANKKIMKVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFKVPFEYNVIAKKWETIQLEELKIKKDEVVIVNCMYRLKNLPDDTLSSTSARDIVLKLIRSINPEFFIHGISNGTYNAPFFVTRFREALFHFSAIFDIFEANVPRDDPQRMMFEREILGRDIMNVVACEGIERVERPETYKQWQARTLRAGFKQIPLDQELVKKVTNMVQSNYHRDFIIDVDGRWMLQGWKGRVIFALSCWK
Gorai.003G130400.2
GRAS
237
608
LWSLLTQCAQAVAINDQRTANELLKQISQNSSTTGDGTQRFANYFADALTTRLAGMGAPSYSPLVSNRTSAADILKAYRVLVLACPFKKMMHFYANKKIMKVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGFRPAERVEETGRRLKRYCERFKVPFEYNVIAKKWETIQLEELKIKKDEVVIVNCMYRLKNLPDDTLSSTSARDIVLKLIRSINPEFFIHGISNGTYNAPFFVTRFREALFHFSAIFDIFEANVPRDDPQRMMFEREILGRDIMNVVACEGIERVERPETYKQWQARTLRAGFKQIPLDQELVKKVTNMVQSNYHRDFIIDVDGRWMLQGWKGRVIFALSCWK
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_06293
Aspergillus nidulans
CADANIAG00010534
N
0.000
BAUCODRAFT_130166
Baudoinia compniacensis
BAUCODRAFT_130166
N
0.000
CIMG_05220
Coccidioides immitis
CIMG_05220
N
0.000
CPC735_064880
Coccidioides posadasii
CPC735_064880
N
0.000
DOTSEDRAFT_66782
Dothistroma septosporum
DOTSEDRAFT_66782
N
0.000
estExt_Genewise1Plus.C_20247
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_20247
N
0.000
EURHEDRAFT_513555
Aspergillus ruber
EURHEDRAFT_513555
N
0.000
GSTUM_00008596001
Tuber melanosporum
GSTUM_00008596001
N
0.000
HMPREF1541_02999
Cyphellophora europaea
HMPREF1541_02999
N
0.000
M422DRAFT_215363
Sphaerobolus stellatus
M422DRAFT_215363
N
0.000
M422DRAFT_232009
Sphaerobolus stellatus
M422DRAFT_232009
N
0.000
M438DRAFT_275275
Aureobasidium pullulans
M438DRAFT_275275
N
0.000
MYCFIDRAFT_56164
Pseudocercospora fijiensis
MYCFIDRAFT_56164
N
0.000
OIDMADRAFT_194965
Oidiodendron maius
OIDMADRAFT_194965
I
0.000
PV04_07332
Capronia semiimmersa
PV04_07332
N
0.000
PV05_10153
Exophiala xenobiotica
PV05_10153
N
0.000
PV06_09439
Exophiala oligosperma
PV06_09439
N
0.000
PV07_11052
Cladophialophora immunda
PV07_11052
N
0.000
PV10_03194
Exophiala mesophila
PV10_03194
N
0.000
PV11_09075
Exophiala sideris
PV11_09075
N
0.000
SEPMUDRAFT_145522
Sphaerulina musiva
SEPMUDRAFT_145522
N
0.000
TESG_01285
Trichophyton tonsurans
TESG_01285
N
0.000