CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G130500
(
Gossypium raimondii
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Gorai.003G130500
T202612_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G130500.1
GRAS
383
758
LRTLLILCAQAVSADDRRTASELLKQIKEHSSPLGDANQRLAYIFADGLEARLDGSGALIHVFYASLASKMTTAADILKAYKAYLCSCPFTKLAILFANKSIYHMAEKASVLHIVDFGILYGFQWPILIQHLSTRPGGPPKLRITGIEIPQRGFRPAERIEETGRRLAKYCERFNVPFEYNPIAVEHWETIQIEDIKIDSNEMLAVNSLFRFHNLLDETADVDCPRNAMLKLIRKMKPDIFVHSIVNGAYNAPFFVTRFKEVLFHISAVFDVFENTLPREEPARLMFEREFYGREAMNVIACEGSARVQRPETYKQWQIRTLREGFKPLPLDQELMKIIRDKLKAWYHKDFVIDEDNHWMLQGWKGRILYGSSCWV
Links
Other
GRAS
family TFs
Other
Gossypium raimondii
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R008287
Calypte anna
Aan_R008287
I
0.000
Afo_R009044
Aptenodytes forsteri
Afo_R009044
I
0.000
Brh_R010628
Buceros rhinoceros
Brh_R010628
I
0.000
ENSAMEG00000007074
Ailuropoda melanoleuca
ENSAMEG00000007074
I
0.000
ENSAPLG00000003934
Anas platyrhynchos
ENSAPLG00000003934
I
0.000
ENSFALG00000007450
Ficedula albicollis
ENSFALG00000007450
I
0.000
ENSLACG00000016839
Latimeria chalumnae
ENSLACG00000016839
I
0.000
ENSMEUG00000016293
Macropus eugenii
ENSMEUG00000016293
I
0.000
ENSNLEG00000004385
Nomascus leucogenys
ENSNLEG00000004385
I
0.000
ENSP00000266269
Macaca fascicularis
ENSP00000266269
I
0.000
ENSPPYG00000011732
Pongo abelii
ENSPPYG00000011732
I
0.000
ENSPSIG00000011562
Pelodiscus sinensis
ENSPSIG00000011562
I
0.000
ENSPSIG00000016553
Pelodiscus sinensis
ENSPSIG00000016553
I
0.000
ENSSTOG00000020707
Ictidomys tridecemlineatus
ENSSTOG00000020707
I
0.000
Gfo_R010882
Geospiza fortis
Gfo_R010882
I
0.000
Myotis_brandtii_PATZ1_10027570
Myotis brandtii
Myotis_brandtii_PATZ1_10027570
I
0.000
PATZ1
Gallus gallus
ENSGALG00000006934
I
0.000
PATZ1
Bos taurus
ENSBTAG00000005478
I
0.000
PATZ1
Canis familiaris
ENSCAFG00000013087
I
0.000
PATZ1
Cavia porcellus
ENSCPOG00000010787
I
0.000
PATZ1
Tursiops truncatus
ENSTTRG00000010279
I
0.000
PATZ1
Pteropus vampyrus
ENSPVAG00000001749
I
0.000
PATZ1
Pan troglodytes
ENSPTRG00000014268
I
0.000
PATZ1
Otolemur garnettii
ENSOGAG00000027905
I
0.000
PATZ1
Ornithorhynchus anatinus
ENSOANG00000014654
I
0.000
PATZ1
Dasypus novemcinctus
ENSDNOG00000003183
I
0.000
Patz1
Mus musculus
ENSMUSG00000020453
I
0.000
PATZ1
Macaca mulatta
ENSMMUG00000013911
I
0.000
PATZ1
Myotis lucifugus
ENSMLUG00000009942
I
0.000
PATZ1
Microcebus murinus
ENSMICG00000005430
I
0.000
PATZ1
Meleagris gallopavo
ENSMGAG00000008439
I
0.000
PATZ1
Homo sapiens
ENSG00000100105
D
0.000
PATZ1
Loxodonta africana
ENSLAFG00000002317
I
0.000
PATZ1
Gorilla gorilla
ENSGGOG00000017171
I
0.000
Pvit_03702
Pogona vitticeps
Pvit_03702
I
0.000
Tal_R008892
Tyto alba
Tal_R008892
I
0.000