CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Lus10009133.g
(
Linum usitatissimum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Lus10009133.g
T202693_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Lus10009133
GRAS
1
178
MLDLRPADVEAVAVNSVFELHRLLSQSAGIDKVLSSIKAMKPKIVTVVEQEANHNGPVFVDRFTEALHYYSSLFDSLEGSSPSQDLVMSELYLGRQICNVVACEGGDRVERHETLTQWRGRMESAGFDPVHLGSNAYKQASTLLALFAGGDGYKVEENDGSLMLGWHTRPLIATSAWQ
Links
Other
GRAS
family TFs
Other
Linum usitatissimum
TFs
43 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG013447.1
Alligator sinensis
Alligator_sinensis_CCG013447.1
I
ARHGAP30
Dasypus novemcinctus
ENSDNOG00000005811
I
B39674
Xenopus laevis
B39674
I
ENSAMEG00000015606
Ailuropoda melanoleuca
ENSAMEG00000015606
I
ENSCSAG00000002622
Chlorocebus sabaeus
ENSCSAG00000002622
I
ENSLACG00000001157
Latimeria chalumnae
ENSLACG00000001157
I
ENSLOCG00000000641
Lepisosteus oculatus
ENSLOCG00000000641
I
ENSMEUG00000009683
Macropus eugenii
ENSMEUG00000009683
I
ENSMMUP00000002682
Macaca fascicularis
ENSMMUP00000002682
I
ENSMPUG00000014181
Mustela putorius furo
ENSMPUG00000014181
I
ENSNLEG00000013935
Nomascus leucogenys
ENSNLEG00000013935
I
ENSOARG00000003162
Ovis aries
ENSOARG00000003162
I
ENSOARG00000009376
Ovis aries
ENSOARG00000009376
I
ENSOGAG00000006705
Otolemur garnettii
ENSOGAG00000006705
I
ENSONIG00000016360
Oreochromis niloticus
ENSONIG00000016360
I
ENSP00000357000-D1
Bos grunniens
ENSP00000357000-D1
I
ENSPANG00000016141
Papio anubis
ENSPANG00000016141
I
ENSPPYG00000000619
Pongo abelii
ENSPPYG00000000619
I
ENSPSIG00000008116
Pelodiscus sinensis
ENSPSIG00000008116
I
ENSSHAG00000016124
Sarcophilus harrisii
ENSSHAG00000016124
I
ENSSTOG00000012364
Ictidomys tridecemlineatus
ENSSTOG00000012364
I
Ogr08237
Ophisaurus gracilis
Ogr08237
I
PHUM287950
Pediculus humanus
PHUM287950
I
Pvit_07548
Pogona vitticeps
Pvit_07548
I
USF1
Sus scrofa
ENSSSCG00000006371
I
Usf1
Rattus norvegicus
ENSRNOG00000004255
I
USF1
Tupaia belangeri
ENSTBEG00000003164
I
USF1
Tursiops truncatus
ENSTTRG00000009151
I
USF1
Pteropus vampyrus
ENSPVAG00000005489
I
USF1
Pan troglodytes
ENSPTRG00000001565
I
usf1
Xenopus tropicalis
XB-GENE-5918718
I
USF1
Bos taurus
ENSBTAG00000017873
I
USF1
Oryctolagus cuniculus
ENSOCUG00000002352
I
USF1
Canis familiaris
ENSCAFG00000012689
I
USF1
Choloepus hoffmanni
ENSCHOG00000011010
I
USF1
Callithrix jacchus
ENSCJAG00000005396
I
USF1
Cavia porcellus
ENSCPOG00000003957
I
USF1
Equus caballus
ENSECAG00000004755
I
USF1
Felis catus
ENSFCAG00000012307
I
USF1
Homo sapiens
ENSG00000158773
D
USF1
Gorilla gorilla
ENSGGOG00000003935
I
USF1
Loxodonta africana
ENSLAFG00000011338
I
USF1
Microcebus murinus
ENSMICG00000007199
I
USF1
Myotis lucifugus
ENSMLUG00000009179
I
USF1
Macaca mulatta
ENSMMUG00000002003
I
USF1
Monodelphis domestica
ENSMODG00000005443
I
Usf1
Mus musculus
ENSMUSG00000026641
D
USF1
Ochotona princeps
ENSOPRG00000003858
I
usf1.S
Xenopus laevis
XB-GENE-6255904
I