CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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orange1.1g045051m.g
(
Citrus sinensis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
orange1.1g045051m.g
T202955_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
orange1.1g045051m
GRAS
325
696
LWTLLTLCAQAVANYDQRTANDFLKQIRQHSSPFGDGIQRLAHYFANGLEVRLAGTRTPVQTHLASSRASAAEVLQAYKVYVSSCPFNRMTFFMANRMILKLAEKATRLHIVDFGIGYGFQWPCLIQRISKRPGGPPKIRMTAIEFPQPGFKPAERVEETGHRLKCYSQRFGVPFEYNTIAQKWQNIQLEDLKIDREEMTVVNCLYRMRNLPDDTVVINSPRDAVLELIKKINPDIFIHGVVNGTYNAPFFLPRFREALFHFSTFFDMFESTVPREDQGRMIFEREIYGKDAMNVIACEGIERVERPETYKQWQARNLRAGFKQLELDKDILKTIRTLVKSNFHPDFVIDEAGEWMLQGWKGRLAYALSFWK
Links
Other
GRAS
family TFs
Other
Citrus sinensis
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA029516
Oryza indica
BGIOSGA029516
N
0.000
BRADI1G34320
Brachypodium distachyon
BRADI1G34320
N
0.000
BRADI4G34050
Brachypodium distachyon
BRADI4G34050
N
0.000
Ciclev10008843m.g
Citrus clementina
Ciclev10008843m.g
N
0.000
F775_07408
Aegilops tauschii
F775_07408
N
0.000
GRMZM2G025095
Zea mays
GRMZM2G025095
N
0.000
GRMZM2G168269
Zea mays
GRMZM2G168269
N
0.000
GSMUA_Achr3G05490_001
Musa acuminata
GSMUA_Achr3G05490_001
N
0.000
GSMUA_Achr9G14080_001
Musa acuminata
GSMUA_Achr9G14080_001
N
0.000
LPERR09G11190
Leersia perrieri
LPERR09G11190
N
0.000
MLOC_66533
Hordeum vulgare
MLOC_66533
N
0.000
OB09G21610
Oryza brachyantha
OB09G21610
N
0.000
OBART09G15030
Oryza barthii
OBART09G15030
N
0.000
OGLUM09G15680
Oryza glumaepatula
OGLUM09G15680
N
0.000
OLONG_025649
Oryza longistaminata
OLONG_025649
N
0.000
OMERI07G04230
Oryza meridionalis
OMERI07G04230
N
0.000
ONIVA09G15650
Oryza nivara
ONIVA09G15650
N
0.000
ORGLA09G0115900
Oryza glaberrima
ORGLA09G0115900
N
0.000
ORUFI09G16230
Oryza rufipogon
ORUFI09G16230
N
0.000
OS09G0494300
Oryza sativa
OS09G0494300
N
0.000
Pavir.Ba01676
Panicum virgatum
Pavir.Ba01676
N
0.000
Pavir.J30425
Panicum virgatum
Pavir.J30425
N
0.000
PGSC0003DMG400013699
Solanum tuberosum
PGSC0003DMG400013699
N
0.000
Sb02g028780
Sorghum bicolor
Sb02g028780
N
0.000
Si030613m.g
Setaria italica
Si030613m.g
N
0.000
Solyc05g047450.1
Solanum lycopersicum
Solyc05g047450.1
N
0.000
Traes_5BL_445FD57BE
Triticum aestivum
Traes_5BL_445FD57BE
N
0.000
Traes_5DL_F17F78F73
Triticum aestivum
Traes_5DL_F17F78F73
N
0.000
TRIUR3_24492
Triticum urartu
TRIUR3_24492
N
0.000