Pavir.Aa00854 (Panicum virgatum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Pavir.Aa00854 T202966_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Aa00854.1.p GRAS 2 304
Pavir.Aa00854.2.p GRAS 2 304
Pavir.Aa00854.3.p GRAS 2 304
Pavir.Aa00854.4.p GRAS 2 304

Links

Other GRAS family TFs
Other Panicum virgatum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_007_00377 Aquilegia coerulea Aquca_007_00377 N
AT1G06070 Arabidopsis thaliana AT1G06070 D
Bo5g007170 Brassica oleracea Bo5g007170 I
Bo8g005940 Brassica oleracea Bo8g005940 I
Bostr.25219s0353 Boechera stricta Bostr.25219s0353 I
Bra015471 Brassica rapa Bra015471 I
Bra030637 Brassica rapa Bra030637 I
Cagra.1671s0236 Capsella grandiflora Cagra.1671s0236 I
Carubv10008993m.g Capsella rubella Carubv10008993m.g I
cassava32399.m1 Manihot esculenta cassava32399.m1 I
cassava43164.valid.m1 Manihot esculenta cassava43164.valid.m1 I
Ca_02692 Cicer arietinum Ca_02692 I
chr3.CM0106.340.nd Lotus japonicus chr3.CM0106.340.nd I
Cucsa.062530 Cucumis sativus Cucsa.062530 I
Cucsa.251880 Cucumis sativus Cucsa.251880 I
Eucgr.D00737 Eucalyptus grandis Eucgr.D00737 I
fgenesh1_pg.scaffold_3000202 Physcomitrella patens fgenesh1_pg.scaffold_3000202 N
gene23487-v1.0-hybrid Fragaria vesca gene23487-v1.0-hybrid I
GLYMA11G13510 Glycine max GLYMA11G13510 I
GLYMA12G05520 Glycine max GLYMA12G05520 I
GLYMA13G42030 Glycine max GLYMA13G42030 I
GLYMA15G03350 Glycine max GLYMA15G03350 I
Gorai.005G015900 Gossypium raimondii Gorai.005G015900 I
Gorai.006G229500 Gossypium raimondii Gorai.006G229500 I
Gorai.011G140400 Gossypium raimondii Gorai.011G140400 I
Lus10019376.g Linum usitatissimum Lus10019376.g I
MLOC_64781 Hordeum vulgare MLOC_64781 I
OB09G23080 Oryza brachyantha OB09G23080 I
OGLUM09G17020 Oryza glumaepatula OGLUM09G17020 I
OMERI09G12160 Oryza meridionalis OMERI09G12160 I
PK20942.1 Cannabis sativa PK20942.1 D
POPTR_0017s05610 Populus trichocarpa POPTR_0017s05610 I
RF2A Oryza sativa OS09G0516200 I
scaffold_100594.1 Arabidopsis lyrata scaffold_100594.1 I
Solyc06g053350.2 Solanum lycopersicum Solyc06g053350.2 I
TCM_019998 Theobroma cacao TCM_019998 I
Thhalv10007692m.g Eutrema salsugineum Thhalv10007692m.g I
Traes_7DS_47B5A7FFF Triticum aestivum Traes_7DS_47B5A7FFF I
TRIUR3_16287 Triticum urartu TRIUR3_16287 I
VIT_05s0102g01120 Vitis vinifera VIT_05s0102g01120 I