CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.Ba00637
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.Ba00637
T202971_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Ba00637.1.p
GRAS
151
515
LLSLLLRCAEAVAMDQLTEARELLPEIAELASPFGSSPERVAAYFGDALCARVLSSYLGAYSPLALRPLAAAQSRRVAGAFQAYNALSPLVKFSHFTANQAILQALDGEDRLHVIDLDIMQGLQWPGLFHILASRPRKPRSLRVTGLGASLDVLEATGRRLADFAASLGLPFEFQPIEGKIGHVADAAALLGPRHRQQQDEATVVHWMHHCLYDVTGSDVGTVRLLRSLRPKLITIVEQDLGHSGDFLGRFVEALHYYSALFDALGDGAGAAAAESAERHAVERQLLGAEIRNIVAVGGPKRTGEVRVERWGDELRRAGFRPVSLAGSPAAQARLLLGMYPWKGYTLVEDAACLKLGWKDLSLLT
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000004806
Ailuropoda melanoleuca
ENSAMEG00000004806
N
ENSBTAG00000000943
Bos taurus
ENSBTAG00000000943
N
ENSBTAP00000001247-D1
Bos grunniens
ENSBTAP00000001247-D1
N
ENSCAFG00000031764
Canis familiaris
ENSCAFG00000031764
N
ENSCJAG00000004366
Callithrix jacchus
ENSCJAG00000004366
N
ENSCPOG00000012429
Cavia porcellus
ENSCPOG00000012429
N
ENSCSAG00000008839
Chlorocebus sabaeus
ENSCSAG00000008839
N
ENSDNOG00000047188
Dasypus novemcinctus
ENSDNOG00000047188
N
ENSDORG00000003193
Dipodomys ordii
ENSDORG00000003193
N
ENSETEG00000005043
Echinops telfairi
ENSETEG00000005043
N
ENSFCAG00000029151
Felis catus
ENSFCAG00000029151
N
ENSGGOG00000022789
Gorilla gorilla
ENSGGOG00000022789
N
ENSLAFG00000016102
Loxodonta africana
ENSLAFG00000016102
N
ENSMLUG00000015932
Myotis lucifugus
ENSMLUG00000015932
N
ENSMMUG00000002354
Macaca mulatta
ENSMMUG00000002354
N
ENSMMUP00000003150
Macaca fascicularis
ENSMMUP00000003150
N
ENSMPUG00000010104
Mustela putorius furo
ENSMPUG00000010104
N
ENSNLEG00000014652
Nomascus leucogenys
ENSNLEG00000014652
N
ENSOARG00000016792
Ovis aries
ENSOARG00000016792
N
ENSOCUG00000024037
Oryctolagus cuniculus
ENSOCUG00000024037
N
ENSOGAG00000005719
Otolemur garnettii
ENSOGAG00000005719
N
ENSOPRG00000013892
Ochotona princeps
ENSOPRG00000013892
N
ENSPANG00000023728
Papio anubis
ENSPANG00000023728
N
ENSPPYG00000029913
Pongo abelii
ENSPPYG00000029913
N
ENSPVAG00000015636
Pteropus vampyrus
ENSPVAG00000015636
N
ENSSSCG00000018029
Sus scrofa
ENSSSCG00000018029
N
ENSSTOG00000024669
Ictidomys tridecemlineatus
ENSSTOG00000024669
N
ENSTSYG00000002897
Tarsius syrichta
ENSTSYG00000002897
N
ENSTTRG00000017194
Tursiops truncatus
ENSTTRG00000017194
N
ENSVPAG00000012293
Vicugna pacos
ENSVPAG00000012293
N
Zfp286
Mus musculus
ENSMUSG00000047342
N
Zfp286a
Rattus norvegicus
ENSRNOG00000003218
N
ZNF286A
Pan troglodytes
ENSPTRG00000008803
N
ZNF286A
Homo sapiens
ENSG00000187607
N