CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J10950
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J10950
T203051_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J10950.1.p
GRAS
1
189
METIRAEDLNLDPEEVLIVNCIYQFKNLMDDSVLIESPRDVALNNIRKMRPHAFIHGIVNGSFSAPFFVTRFREALFYYSALFDVLDTTTPRDSNQRMLIEQNIFGRAALNVIACEGTDRVERPETYKQWQVRNQRAGLKQLPLNPNIVQVVRDKVKECYHKDFVIDIDHHWLLQGWKGRILFAISTWV
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_10816
Aegilops tauschii
F775_10816
N
F775_12958
Aegilops tauschii
F775_12958
N
GRMZM2G117497
Zea mays
GRMZM2G117497
N
TRAES3BF091700020CFD_g
Triticum aestivum
TRAES3BF091700020CFD_g
N
Traes_5DL_3FC31F9ED
Triticum aestivum
Traes_5DL_3FC31F9ED
N
TRIUR3_05647
Triticum urartu
TRIUR3_05647
N
TRIUR3_15905
Triticum urartu
TRIUR3_15905
N