CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pavir.J31658
(
Panicum virgatum
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Pavir.J31658
T203084_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.J31658.1.p
GRAS
244
617
LQALLLRCAQAVATDDRGTAHDLLAQIRRHASPTGDAAQRLAHCFAEGLEARLAGTGSRLYHSLMLRRTSAVHFLRAYQLFMAACCCKKVAFAFSNKTISDAVKARRRLHIVDYGLGYGFQWPGLLRGLAARDGGPPEVRITGIDLPQPGFRPAYQIQETGRRLSDCAREFGVPFMFRGIAAKRETVSPEDLDIDRAEVLVVSSLCHFRHLMDESIVLGRPSPRDEVLGNIGRMQPDVFIHGVMNGGYGTTYFPTRFREALFHYSAQFDLLDATVPRDSQERMLVERDIFGRAALNVIACEGADRVERPETYKQWQARNQRAGLRQLPLKPEVAKVVLDKVRDNYHKDFIVDEDQAWLLHRWKGRVLYGLSTWV
Links
Other
GRAS
family TFs
Other
Panicum virgatum
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ARB_04772
Arthroderma benhamiae
ARB_04772
N
BDDG_00804
Blastomyces dermatitidis
BDDG_00804
N
CIMG_05222
Coccidioides immitis
CIMG_05222
N
CPC735_064900
Coccidioides posadasii
CPC735_064900
N
H101_07738
Trichophyton interdigitale
H101_07738
N
H105_05916
Trichophyton soudanense
H105_05916
N
HCBG_01014
Histoplasma capsulatum
HCBG_01014
N
MCYG_04260
Microsporum canis
MCYG_04260
N
MCYG_04260
Arthroderma otae
MCYG_04260
N
MGYG_02348
Microsporum gypseum
MGYG_02348
N
PAAG_06200
Paracoccidioides sp lutzii
PAAG_06200
N
PABG_05221
Paracoccidioides brasiliensis
PABG_05221
N
TEQG_08051
Trichophyton equinum
TEQG_08051
N
TESG_01289
Trichophyton tonsurans
TESG_01289
N
TRV_06373
Trichophyton verrucosum
TRV_06373
N
UREG_06397
Uncinocarpus reesii
UREG_06397
N