CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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chr2.CM0018.90.nc
(
Lotus japonicus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
chr2.CM0018.90.nc
T203272_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
chr2.CM0018.90.nc
GRAS
49
471
LIHLLLTCANHVAAGSLENANITLEQISQLASPDGDTMQRIAAYFTEALADRILKTWPGLHRALNSTRIVMVSEEILVQKLFFELFPFLKVAYILTNQAIIEAMEGEKMVHIIDLNAAEPAQWIALLQVLSARPEGTPHLRITGVHQQKEILDQMAHKLTEEAEKLDIPFQFNPVLSKLENLDFDKLRVKTGEALAISSIMQLHSLLALDDESGRRKSPLLSKHSNGIHLQKVLLMNQNTLGDFLKKDMVNSYSPSTDSASSSPVSSTTSMNAESFLNALWGLSPKVLVVTEQDSNHNGSTLMERLLEALYSYAALFDCLESTVSRTSLERIKVEKMLFGEEIKNIIACEGAERKERHEKLDKWLQRLDVSGFSNTPLSYYGMLQARRFLQSYGCEGYRMREENGSVVMCWQDRSLFSTTAWR
Links
Other
GRAS
family TFs
Other
Lotus japonicus
TFs
70 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMXG00000016320
Astyanax mexicanus
ENSAMXG00000016320
N
0.000
ENSGACG00000005679
Gasterosteus aculeatus
ENSGACG00000005679
N
0.000
ENSLOCG00000009278
Lepisosteus oculatus
ENSLOCG00000009278
N
0.000
ENSONIG00000007283
Oreochromis niloticus
ENSONIG00000007283
N
0.000
ENSONIG00000014019
Oreochromis niloticus
ENSONIG00000014019
N
0.000
ENSPFOG00000003808
Poecilia formosa
ENSPFOG00000003808
N
0.000
ENSXMAG00000001501
Xiphophorus maculatus
ENSXMAG00000001501
N
0.000
ZHX1
Gasterosteus aculeatus
ENSGACG00000002041
N
0.000
ZHX1
Oryctolagus cuniculus
ENSOCUG00000009776
N
0.000
ZHX1
Oryzias latipes
ENSORLG00000001031
N
0.000
ZHX1
Tetraodon nigroviridis
ENSTNIG00000019079
N
0.000
ZHX1
Takifugu rubripes
ENSTRUG00000010521
N
0.000
ZHX1
Takifugu rubripes
ENSTRUG00000017544
N
0.000