chr3.CM0106.470.nd (Lotus japonicus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 chr3.CM0106.470.nd T203274_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
chr3.CM0106.470.nd GRAS 54 437

Links

Other GRAS family TFs
Other Lotus japonicus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_058_00064 Aquilegia coerulea Aquca_058_00064 N 0.744
cassava11920.valid.m1 Manihot esculenta cassava11920.valid.m1 N 0.793
Ca_02696 Cicer arietinum Ca_02696 N 0.815
Ciclev10020072m.g Citrus clementina Ciclev10020072m.g N 0.788
Cla007135 Citrullus lanatus Cla007135 N 0.725
Cucsa.362140 Cucumis sativus Cucsa.362140 N 0.708
Eucgr.A00109 Eucalyptus grandis Eucgr.A00109 N 0.774
evm.TU.supercontig_9.323 Carica papaya evm.TU.supercontig_9.323 N 0.763
GLYMA13G42100 Glycine max GLYMA13G42100 N 0.833
GLYMA15G03290 Glycine max GLYMA15G03290 N 0.826
Gorai.011G140100 Gossypium raimondii Gorai.011G140100 N 0.774
Gorai.011G140300 Gossypium raimondii Gorai.011G140300 N 0.772
GSMUA_Achr9G02380_001 Musa acuminata GSMUA_Achr9G02380_001 N 0.702
mgf025327m Mimulus guttatus mgf025327m N 0.740
MTR_2g099110 Medicago truncatula MTR_2g099110 N 0.804
PGSC0003DMG400014615 Solanum tuberosum PGSC0003DMG400014615 N 0.738
PK11022.1 Cannabis sativa PK11022.1 N 0.779
Pm007259 Prunus mume Pm007259 N 0.785
POPTR_0007s01650 Populus trichocarpa POPTR_0007s01650 N 0.780
POPTR_0017s05450 Populus trichocarpa POPTR_0017s05450 N 0.804
PRUPE_ppa1027119mg Prunus persica PRUPE_ppa1027119mg N 0.785
SapurV1A.0485s0200 Salix purpurea SapurV1A.0485s0200 N 0.741
SapurV1A.0791s0060 Salix purpurea SapurV1A.0791s0060 N 0.799
SapurV1A.1272s0060 Salix purpurea SapurV1A.1272s0060 N 0.799
SapurV1A.1357s0040 Salix purpurea SapurV1A.1357s0040 N 0.777
Solyc08g014030.1 Solanum lycopersicum Solyc08g014030.1 N 0.738
TCM_019978 Theobroma cacao TCM_019978 N 0.785
VIT_00s0226g00070 Vitis vinifera VIT_00s0226g00070 N 0.783