Bra034196 (Brassica rapa)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 Bra034196 T205172_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK25011.1
M01253_2.00 		Cannabis sativa
NNWYRMDBNN
NNVHKYRWNN		 PBM
Lambert et al.(2019)
pTH11258 		0.674 0.789
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra034196.1-P Homeodomain 13 69

Links

Other Homeodomain family TFs
Other Brassica rapa TFs

70 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB00149.1 Alternaria brassicicola AB00149.1 I 0.000
ACLA_091820 Aspergillus clavatus CADACLAG00008439 I 0.000
AFUA_2G03020 Aspergillus fumigatus CADAFUAG00003420 I 0.000
ANIA_04524 Aspergillus nidulans CADANIAG00005916 D 0.000
BBA_03262 Beauveria bassiana BBA_03262 I 0.000
BDDG_01946 Blastomyces dermatitidis BDDG_01946 I 0.000
CADAORAG00008664 Aspergillus oryzae CADAORAG00008664 I 0.000
CGGC5_5234 Colletotrichum gloeosporioides CGGC5_5234 I 0.000
CH063_08705 Colletotrichum higginsianum CH063_08705 I 0.000
CHGG_05536 Chaetomium globosum CHGG_05536 I 0.000
CIMG_04575 Coccidioides immitis CIMG_04575 I 0.000
Cob_12050 Colletotrichum orbiculare Cob_12050 I 0.000
COCCADRAFT_36163 Bipolaris zeicola COCCADRAFT_36163 I 0.000
COCMIDRAFT_32036 Bipolaris oryzae COCMIDRAFT_32036 I 0.000
COCSADRAFT_213056 Bipolaris sorokiniana COCSADRAFT_213056 I 0.000
COCVIDRAFT_83639 Bipolaris victoriae COCVIDRAFT_83639 I 0.000
CPC735_072160 Coccidioides posadasii CPC735_072160 I 0.000
DOTSEDRAFT_116530 Dothistroma septosporum DOTSEDRAFT_116530 I 0.000
estExt_Genewise1Plus.C_21297 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_21297 I 0.000
e_gw1.00009.336.1 Aspergillus carbonarius e_gw1.00009.336.1 I 0.000
FFUJ_07927 Fusarium fujikuroi FFUJ_07927 I 0.000
fgenesh1_pg.sca_20_chr6_4_0000490 Nectria haematococca fgenesh1_pg.sca_20_chr6_4_0000490 I 0.000
FGRRES_02538 Fusarium graminearum FGRRES_02538 I 0.000
FOXG_10566 Fusarium oxysporum FOXG_10566 I 0.000
FPSE_08658 Fusarium pseudograminearum FPSE_08658 I 0.000
FVEG_09213 Fusarium verticillioides FVEG_09213 I 0.000
GSTUM_00007236001 Tuber melanosporum GSTUM_00007236001 I 0.000
gw1.1.3793.1 Mycosphaerella graminicola gw1.1.3793.1 I 0.000
gw1.13.456.1 Mycosphaerella fijiensis gw1.13.456.1 I 0.000
H072_4198 Dactylellina haptotyla H072_4198 I 0.000
H101_05733 Trichophyton interdigitale H101_05733 I 0.000
HCBG_00496 Histoplasma capsulatum HCBG_00496 I 0.000
LEMA_P069020.1 Leptosphaeria maculans LEMA_P069020.1 I 0.000
MCYG_05889 Microsporum canis MCYG_05889 I 0.000
MCYG_05889 Arthroderma otae MCYG_05889 I 0.000
MGYG_06082 Microsporum gypseum MGYG_06082 I 0.000
MPH_09871 Macrophomina phaseolina MPH_09871 I 0.000
MYCFIDRAFT_112048 Pseudocercospora fijiensis MYCFIDRAFT_112048 I 0.000
Mycgr3G28684 Zymoseptoria tritici Mycgr3G28684 I 0.000
NCU07834 Neurospora crassa NCU07834 D 0.000
NechaG81864 Fusarium solani NechaG81864 I 0.000
NEUTE1DRAFT_80911 Neurospora tetrasperma NEUTE1DRAFT_80911 I 0.000
NFIA_035370 Neosartorya fischeri CADNFIAG00003845 I 0.000
PAAG_06795 Paracoccidioides sp lutzii PAAG_06795 I 0.000
PABG_01081 Paracoccidioides brasiliensis PABG_01081 I 0.000
PFICI_05808 Pestalotiopsis fici PFICI_05808 I 0.000
PMAA_055660 Penicillium marneffei PMAA_055660 I 0.000
PMAA_055660 Talaromyces marneffei PMAA_055660 I 0.000
PTRG_10693 Pyrenophora triticirepentis PTRG_10693 I 0.000
PTT_08996 Pyrenophora teres PTT_08996 I 0.000
PV09_00458 Verruconis gallopava PV09_00458 I 0.000
PVAR5_1965 Byssochlamys spectabilis PVAR5_1965 I 0.000
S40285_00496 Stachybotrys chlorohalonata S40285_00496 I 0.000
SETTUDRAFT_41277 Setosphaeria turcica SETTUDRAFT_41277 I 0.000
SNOG_09800 Phaeosphaeria nodorum SNOG_09800 I 0.000
SNOG_09800 Stagonospora nodorum SNOG_09800 I 0.000
TEQG_06366 Trichophyton equinum TEQG_06366 I 0.000
TSTA_016710 Talaromyces stipitatus TSTA_016710 I 0.000
UCRNP2_4750 Neofusicoccum parvum UCRNP2_4750 I 0.000
W97_06488 Coniosporium apollinis W97_06488 I 0.000