CBG00023 (Caenorhabditis briggsae)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 CBG00023 T205507_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG00023
M02062_2.00		 Caenorhabditis briggsae
NWWATKDNNN
NNNHMATWWN		 PBM
Weirauch et al.(2014)
pTH5778		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
egl-5
M09581_2.00 		Caenorhabditis elegans
DWTTWATGGS
SCCATWAAWH		 Misc
Heinz et al.(2010)
cElegans-L3-EGL5_modEncode 		0.867 0.982
HOXB7
M00334_2.00 		Homo sapiens
NBRDNNN
NNNHYVN		 PBM
Barrera et al.(2016)
HOXB7_REF 		0.750 0.561
Hoxa7
M00476_2.00 		Mus musculus
NNWAYNDNN
NNHNRTWNN		 PBM
Berger et al.(2008)
Hoxa7_2668 		0.750 0.561
Hoxa7
M00477_2.00 		Mus musculus
NYHHYNNNN
NNNNRDDRN		 PBM
Berger et al.(2008)
Hoxa7_3750 		0.750 0.561
Hoxb7
M00481_2.00 		Mus musculus
NNWAYNDN
NHNRTWNN		 PBM
Berger et al.(2008)
Hoxb7_3953 		0.750 0.561
HOXA7
M05069_2.00 		Homo sapiens
NTAATKRV
BYMATTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_HT-SELEX 		0.750 0.561
HOXB7
M05404_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB7_eDBD_HT-SELEX 		0.750 0.561
HOXB7
M05407_2.00 		Homo sapiens
BBTAATTRCN
NGYAATTAVV		 SELEX
Yin et al.(2017)
HOXB7_FL_HT-SELEX 		0.750 0.561
Antp
M06549_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0166.1 		0.750 0.561
Antp
M06374_2.00 		Drosophila melanogaster
YTTAATKA
TMATTAAR		 B1H
Zhu et al.(2011)
Antp_Cell_FBgn0000095 		0.750 0.561
Antp
M06375_2.00 		Drosophila melanogaster
WTAATW
AATTAW		 B1H
Zhu et al.(2011)
Antp_FlyReg_FBgn0000095 		0.750 0.561
Antp
M06376_2.00 		Drosophila melanogaster
NHTAATKR
YMATTADN		 B1H
Zhu et al.(2011)
Antp_SOLEXA_FBgn0000095 		0.750 0.561
HOXB7
M09166_2.00 		Homo sapiens
MATHAATCAW
WTGATTDATK		 Misc
Kulakovskiy et al.(2013)
HXB7_HUMAN.H11MO.0.C 		0.750 0.561
Hoxb7
M09206_2.00 		Mus musculus
MATHAATCAW
WTGATTDATK		 Misc
Kulakovskiy et al.(2013)
HXB7_MOUSE.H11MO.0.C 		0.750 0.561
Antp
M09682_2.00 		Drosophila melanogaster
TYTTWATKA
TMATWAARA		 Misc
Kulakovskiy et al.(2009)
Antp 		0.750 0.561
Antp
M10789_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ANTP_Q6_01 		0.750 0.561
HOXA7
M10679_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA7_01 		0.750 0.561
HOXA7
M05070_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_1 		0.750 0.561
HOXA7
M05071_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXA7_eDBD_Methyl-HT-SELEX_2 		0.750 0.561
HOXB7
M05405_2.00 		Homo sapiens
BTAATKRV
BYMATTAV		 SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_1 		0.750 0.561
HOXB7
M05406_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB7_eDBD_Methyl-HT-SELEX_2 		0.750 0.561
HOXB7
M05408_2.00 		Homo sapiens
NNTAATKRCN
NGYMATTANN		 SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_1 		0.750 0.561
HOXB7
M05409_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB7_FL_Methyl-HT-SELEX_2 		0.750 0.561
HOXB7
M00333_2.00 		Homo sapiens
NHATWTATTN
NAATAWATDN		 PBM
Barrera et al.(2016)
HOXB7_R189C 		0.750 0.544
CBG00029
M01240_2.00 		Caenorhabditis briggsae
ATTAATTA
TAATTAAT		 PBM
Lambert et al.(2019)
pTH11471 		0.742 0.544
ftz
M03795_2.00 		Drosophila melanogaster
WTAATTRC
GYAATTAW		 SELEX
Nitta et al.(2015)
ftz_1 		0.742 0.509
ftz
M06488_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0225.1 		0.742 0.509
ftz
M06247_2.00 		Drosophila melanogaster
VTTAATKA
TMATTAAB		 B1H
Zhu et al.(2011)
Ftz_Cell_FBgn0001077 		0.742 0.509
ftz
M06248_2.00 		Drosophila melanogaster
TAATKRNH
DNYMATTA		 B1H
Zhu et al.(2011)
ftz_FlyReg_FBgn0001077 		0.742 0.509
ftz
M06249_2.00 		Drosophila melanogaster
BTAATKA
TMATTAV		 B1H
Zhu et al.(2011)
Ftz_SOLEXA_FBgn0001077 		0.742 0.509
ftz
M09679_2.00 		Drosophila melanogaster
YTAATKRNN
NNYMATTAR		 Misc
Kulakovskiy et al.(2009)
ftz 		0.742 0.509
ftz
M10787_2.00 		Drosophila melanogaster
CTTAATTRBHBB
VVDVYAATTAAG		 Transfac
Matys et al.(2006)
I$FTZ_01 		0.742 0.509
Hoxd8
M00436_2.00 		Mus musculus
NNWWYNNN
NNNRWWNN		 PBM
Berger et al.(2008)
Hoxd8_2644 		0.718 0.561
HOXD8
M03221_2.00 		Homo sapiens
VHWAATKWDN
NHWMATTWDB		 SELEX
Jolma et al.(2013)
HOXD8_1 		0.718 0.561
abd-A
M03770_2.00 		Drosophila melanogaster
NNTAATKRCN
NGYMATTANN		 SELEX
Nitta et al.(2015)
abd-A_1 		0.718 0.561
abd-A
M03771_2.00 		Drosophila melanogaster
NNTAATKRCN
NGYMATTANN		 SELEX
Nitta et al.(2015)
abd-A_2 		0.718 0.561
HOXD8
M05310_2.00 		Homo sapiens
BTAATKRY
RYMATTAV		 SELEX
Yin et al.(2017)
HOXD8_eDBD_HT-SELEX 		0.718 0.561
abd-A
M06475_2.00 		Drosophila melanogaster
TTAATKA
TMATTAA		 B1H
Mathelier et al.(2014)
MA0206.1 		0.718 0.561
abd-A
M06210_2.00 		Drosophila melanogaster
WTWATKDM
KHMATWAW		 B1H
Zhu et al.(2011)
Abd-A_FlyReg_FBgn0000014 		0.718 0.561
abd-A
M09671_2.00 		Drosophila melanogaster
HTAATKRH
DYMATTAD		 Misc
Kulakovskiy et al.(2009)
abd-A 		0.718 0.561
abd-A
M10778_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ABDA_Q6 		0.718 0.561
HOXD8
M05311_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_1 		0.718 0.561
HOXD8
M05312_2.00 		Homo sapiens
NTWAYGRY
RYCRTWAN		 SELEX
Yin et al.(2017)
HOXD8_eDBD_Methyl-HT-SELEX_2 		0.718 0.561
Hoxb6
M00381_2.00 		Mus musculus
NNDHNNN
NNNDHNN		 PBM
Berger et al.(2008)
Hoxb6_3428 		0.718 0.544
Hoxc8
M00391_2.00 		Mus musculus
NNDNYNNNN
NNNNRNHNN		 PBM
Berger et al.(2008)
Hoxc8_3429 		0.718 0.544
Hoxa6
M00494_2.00 		Mus musculus
NWWATKRNN
NNYMATWWN		 PBM
Berger et al.(2008)
Hoxa6_1040 		0.718 0.544
Hoxb8
M00517_2.00 		Mus musculus
NWWAYNDNN
NNHNRTWWN		 PBM
Berger et al.(2008)
Hoxb8_3780 		0.718 0.544
Ubx
M00558_2.00 		Drosophila melanogaster
NWWAYDDNN
NNHHRTWWN		 PBM
Busser et al.(2012a)
Ubx 		0.718 0.544
Ubx
M03804_2.00 		Drosophila melanogaster
NTAATKRH
DYMATTAN		 SELEX
Nitta et al.(2015)
Ubx_1 		0.718 0.544
HOXA6
M04974_2.00 		Homo sapiens
NNTAATKRVN
NBYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_HT-SELEX 		0.718 0.544
HOXB6
M04999_2.00 		Homo sapiens
NTAATKRY
RYMATTAN		 SELEX
Yin et al.(2017)
HOXB6_eDBD_HT-SELEX 		0.718 0.544
HOXB8
M05048_2.00 		Homo sapiens
NTAATKRM
KYMATTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_HT-SELEX 		0.718 0.544
HOXC8
M04912_2.00 		Homo sapiens
NYAATTRN
NYAATTRN		 SELEX
Yin et al.(2017)
HOXC8_FL_HT-SELEX 		0.718 0.544
Ubx
M06499_2.00 		Drosophila melanogaster
NTTAATKR
YMATTAAN		 B1H
Mathelier et al.(2014)
MA0094.2 		0.718 0.544
Ubx
M06273_2.00 		Drosophila melanogaster
NTTAATKR
YMATTAAN		 B1H
Zhu et al.(2011)
Ubx_Cell_FBgn0003944 		0.718 0.544
Ubx
M06274_2.00 		Drosophila melanogaster
TAATKD
HMATTA		 B1H
Zhu et al.(2011)
Ubx_FlyReg_FBgn0003944 		0.718 0.544
Ubx
M06275_2.00 		Drosophila melanogaster
NTTWATKR
YMATWAAN		 B1H
Zhu et al.(2011)
Ubx_SOLEXA_FBgn0003944 		0.718 0.544
HOXB8
M09141_2.00 		Homo sapiens
BMATHAATCAA
TTGATTDATKV		 Misc
Kulakovskiy et al.(2013)
HXB8_HUMAN.H11MO.0.C 		0.718 0.544
Hoxb8
M09214_2.00 		Mus musculus
BMATHAATCAA
TTGATTDATKV		 Misc
Kulakovskiy et al.(2013)
HXB8_MOUSE.H11MO.0.C 		0.718 0.544
Ubx
M09680_2.00 		Drosophila melanogaster
TTAATKR
YMATTAA		 Misc
Kulakovskiy et al.(2009)
Ubx 		0.718 0.544
Ubx
M10788_2.00 		Drosophila melanogaster
NNVNNNNTAATKRNBHNND
HNNDVNYMATTANNNNBNN		 Transfac
Matys et al.(2006)
I$UBX_01 		0.718 0.544
HOXC8
M10636_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXC8_Q3 		0.718 0.544
HOXA6
M04975_2.00 		Homo sapiens
NNTAATKRBN
NVYMATTANN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_1 		0.718 0.544
HOXA6
M04976_2.00 		Homo sapiens
NTAAYGRY
RYCRTTAN		 SELEX
Yin et al.(2017)
HOXA6_eDBD_Methyl-HT-SELEX_2 		0.718 0.544
HOXB6
M05000_2.00 		Homo sapiens
HTAAYGAY
RTCRTTAD		 SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_1 		0.718 0.544
HOXB6
M05001_2.00 		Homo sapiens
NTWATKRB
VYMATWAN		 SELEX
Yin et al.(2017)
HOXB6_eDBD_Methyl-HT-SELEX_2 		0.718 0.544
HOXB8
M05049_2.00 		Homo sapiens
NTAATKRN
NYMATTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_1 		0.718 0.544
HOXB8
M05050_2.00 		Homo sapiens
NTAAYGAY
RTCRTTAN		 SELEX
Yin et al.(2017)
HOXB8_eDBD_Methyl-HT-SELEX_2 		0.718 0.544
HOXC8
M04913_2.00 		Homo sapiens
NYMATKRN
NYMATKRN		 SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_1 		0.718 0.544
HOXC8
M04914_2.00 		Homo sapiens
NTWAYGRY
RYCRTWAN		 SELEX
Yin et al.(2017)
HOXC8_FL_Methyl-HT-SELEX_2 		0.718 0.544
Q8I9J5_9BILA
M02214_2.00 		Spadella cephaloptera
NVTAWTWABN
NVTWAWTABN		 PBM
Weirauch et al.(2014)
pTH6164 		0.713 0.474
Hoxc6
M00392_2.00 		Mus musculus
TTAATTAB
VTAATTAA		 PBM
Berger et al.(2008)
Hoxc6_3954 		0.705 0.526
CBG23031
M01245_2.00 		Caenorhabditis briggsae
NTTWATKRNN
NNYMATWAAN		 PBM
Lambert et al.(2019)
pTH11458 		0.705 0.509
HOXB7
M00331_2.00 		Homo sapiens
NNNNNNY
RNNNNNN		 PBM
Barrera et al.(2016)
HOXB7_K191R 		0.693 0.544
HOXB7
M00332_2.00 		Homo sapiens
NDWATATAYN
NRTATATWHN		 PBM
Barrera et al.(2016)
HOXB7_M190L 		0.674 0.544
Hoxa10
M00382_2.00 		Mus musculus
NHWAYNNNN
NNNNRTWDN		 PBM
Berger et al.(2008)
Hoxa10_2318 		0.608 0.491
Hoxc10
M00421_2.00 		Mus musculus
TTWATKAB
VTMATWAA		 PBM
Berger et al.(2008)
Hoxc10_2779 		0.608 0.491
Hoxd10
M00509_2.00 		Mus musculus
NNNNNNNN
NNNNNNNN		 PBM
Berger et al.(2008)
Hoxd10_2368 		0.608 0.491
HOXC10
M03228_2.00 		Homo sapiens
DTTTWATKDB
VHMATWAAAH		 SELEX
Jolma et al.(2013)
HOXC10_1 		0.608 0.491
HOXC10
M03229_2.00 		Homo sapiens
NNTTWATKRB
VYMATWAANN		 SELEX
Jolma et al.(2013)
HOXC10_2 		0.608 0.491
HOXC10
M03230_2.00 		Homo sapiens
NWTTWAYGAB
VTCRTWAAWN		 SELEX
Jolma et al.(2013)
HOXC10_3 		0.608 0.491
Hoxc10
M03252_2.00 		Mus musculus
DTTTWAYGAY
RTCRTWAAAH		 SELEX
Jolma et al.(2013)
Hoxc10_1 		0.608 0.491
Hoxc10
M03253_2.00 		Mus musculus
DTTTWATKRY
RYMATWAAAH		 SELEX
Jolma et al.(2013)
Hoxc10_2 		0.608 0.491
HOXA10
M05394_2.00 		Homo sapiens
RRTCGTAAAAH
DTTTTACGAYY		 SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_1 		0.608 0.491
HOXA10
M05395_2.00 		Homo sapiens
NTTTTATKRCY
RGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_HT-SELEX_2 		0.608 0.491
HOXA10
M05398_2.00 		Homo sapiens
NRTCRTWAANN
NNTTWAYGAYN		 SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_1 		0.608 0.491
HOXA10
M05399_2.00 		Homo sapiens
NNTTWATKRCN
NGYMATWAANN		 SELEX
Yin et al.(2017)
HOXA10_FL_HT-SELEX_2 		0.608 0.491
HOXC10
M05335_2.00 		Homo sapiens
NDTTTATKRCN
NGYMATAAAHN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_1 		0.608 0.491
HOXC10
M05336_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_HT-SELEX_2 		0.608 0.491
HOXC10
M05339_2.00 		Homo sapiens
NTTTTATKRCN
NGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_1 		0.608 0.491
HOXC10
M05340_2.00 		Homo sapiens
NRTCGTAAAWN
NWTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_FL_HT-SELEX_2 		0.608 0.491
HOXD10
M05112_2.00 		Homo sapiens
NKTTTATKRC
GYMATAAAMN		 SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_1 		0.608 0.491
HOXD10
M05113_2.00 		Homo sapiens
RTCGTAAAHN
NDTTTACGAY		 SELEX
Yin et al.(2017)
HOXD10_eDBD_HT-SELEX_2 		0.608 0.491
HOXD10
M05116_2.00 		Homo sapiens
RGTCGTAAAAH
DTTTTACGACY		 SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_1 		0.608 0.491
HOXD10
M05117_2.00 		Homo sapiens
RRYMATAAAAH
DTTTTATKRYY		 SELEX
Yin et al.(2017)
HOXD10_FL_HT-SELEX_2 		0.608 0.491
Hoxa10
M09170_2.00 		Mus musculus
DCATAAAYYRBH
DVYRRTTTATGH		 Misc
Kulakovskiy et al.(2013)
HXA10_MOUSE.H11MO.0.C 		0.608 0.491
Hoxa10
M10763_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXA10_Q5 		0.608 0.491
HOXD10
M10687_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD10_Q2 		0.608 0.491
HOXD10
M10688_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HOXD10_Q6 		0.608 0.491
HOXA10
M05396_2.00 		Homo sapiens
NGTCGTAAAWN
NWTTTACGACN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_1 		0.608 0.491
HOXA10
M05397_2.00 		Homo sapiens
NTTTTATKRCB
VGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXA10_eDBD_Methyl-HT-SELEX_2 		0.608 0.491
HOXA10
M05400_2.00 		Homo sapiens
NRTCGTWAANN
NNTTWACGAYN		 SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_1 		0.608 0.491
HOXA10
M05401_2.00 		Homo sapiens
NNTTWATKRYN
NRYMATWAANN		 SELEX
Yin et al.(2017)
HOXA10_FL_Methyl-HT-SELEX_2 		0.608 0.491
HOXC10
M05337_2.00 		Homo sapiens
NTTTTATKRCN
NGYMATAAAAN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_1 		0.608 0.491
HOXC10
M05338_2.00 		Homo sapiens
NRTCGTAAAHN
NDTTTACGAYN		 SELEX
Yin et al.(2017)
HOXC10_eDBD_Methyl-HT-SELEX_2 		0.608 0.491
HOXC10
M05341_2.00 		Homo sapiens
DTTTTATKRCH
DGYMATAAAAH		 SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_1 		0.608 0.491
HOXC10
M05342_2.00 		Homo sapiens
VGTCGTAAAHN
NDTTTACGACB		 SELEX
Yin et al.(2017)
HOXC10_FL_Methyl-HT-SELEX_2 		0.608 0.491
HOXD10
M05114_2.00 		Homo sapiens
NTTTTATKRC
GYMATAAAAN		 SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_1 		0.608 0.491
HOXD10
M05115_2.00 		Homo sapiens
GTCGTAAAHN
NDTTTACGAC		 SELEX
Yin et al.(2017)
HOXD10_eDBD_Methyl-HT-SELEX_2 		0.608 0.491
HOXD10
M05118_2.00 		Homo sapiens
VGTCGTAAAAH
DTTTTACGACB		 SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_1 		0.608 0.491
HOXD10
M05119_2.00 		Homo sapiens
DGYAATAAAAH
DTTTTATTRCH		 SELEX
Yin et al.(2017)
HOXD10_FL_Methyl-HT-SELEX_2 		0.608 0.491
Abd-B
M00554_2.00 		Drosophila melanogaster
NWTWAYDDNN
NNHHRTWAWN		 PBM
Busser et al.(2012a)
Abd-B 		0.604 0.579
Abd-B
M03772_2.00 		Drosophila melanogaster
DRTCRTAAAWH
DWTTTAYGAYH		 SELEX
Nitta et al.(2015)
Abd-B_1 		0.604 0.579
Abd-B
M03773_2.00 		Drosophila melanogaster
DTTTTATKRCY
RGYMATAAAAH		 SELEX
Nitta et al.(2015)
Abd-B_2 		0.604 0.579
Abd-B
M03774_2.00 		Drosophila melanogaster
NKCARYAACGACYW
WRGTCGTTRYTGMN		 SELEX
Nitta et al.(2015)
Abd-B_3 		0.604 0.579
Abd-B
M03775_2.00 		Drosophila melanogaster
DTTTWATGKSTTTY
RAAASMCATWAAAH		 SELEX
Nitta et al.(2015)
Abd-B_4 		0.604 0.579
Abd-B
M06476_2.00 		Drosophila melanogaster
TTTATKR
YMATAAA		 B1H
Mathelier et al.(2014)
MA0165.1 		0.604 0.579
Abd-B
M06211_2.00 		Drosophila melanogaster
YCATAAAA
TTTTATGR		 B1H
Zhu et al.(2011)
Abd-B_FlyReg_FBgn0000015 		0.604 0.579
Abd-B
M09672_2.00 		Drosophila melanogaster
YMATAAAAHH
DDTTTTATKR		 Misc
Kulakovskiy et al.(2009)
Abd-B 		0.604 0.579
Abd-B
M10779_2.00 		Drosophila melanogaster
VSNTTDATKRCNNN
NNNGYMATHAANSB		 Transfac
Matys et al.(2006)
I$ABDB_01 		0.604 0.579
Abd-B
M10780_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$ABDB_Q6 		0.604 0.579
Q9GP48_9TURB
M02217_2.00 		Discocelis tigrina
DTAATTAB
VTAATTAH		 PBM
Weirauch et al.(2014)
pTH6515 		0.599 0.456
For this family, TFs with SR scores > 0.599 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02062_2.00 Homeodomain 1 57

DNA Binding Domains

Protein ID Domain From To Sequence
CBG00023 Homeodomain 71 127

Links

Other Homeodomain family TFs
Other Caenorhabditis briggsae TFs

1127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29646.m001068 Ricinus communis 29646.m001068 I
30068.m002661 Ricinus communis 30068.m002661 I
30174.m008698 Ricinus communis 30174.m008698 I
AMTR_s00048p00108400 Amborella trichopoda AMTR_s00048p00108400 I
AMTR_s00059p00094730 Amborella trichopoda AMTR_s00059p00094730 I
Aquca_002_01218 Aquilegia coerulea Aquca_002_01218 I
Aquca_013_00209 Aquilegia coerulea Aquca_013_00209 I
BGIOSGA001085 Oryza indica BGIOSGA001085 I
BGIOSGA007448 Oryza indica BGIOSGA007448 I
BGIOSGA020389 Oryza indica BGIOSGA020389 I
BGIOSGA025382 Oryza indica BGIOSGA025382 I
BGIOSGA036419 Oryza indica BGIOSGA036419 I
Bo1g005460 Brassica oleracea Bo1g005460 I
Bo3g028300 Brassica oleracea Bo3g028300 I
Bo4g038560 Brassica oleracea Bo4g038560 I
Bo4g183320 Brassica oleracea Bo4g183320 I
Bostr.23794s0549 Boechera stricta Bostr.23794s0549 I
Bostr.3359s0141 Boechera stricta Bostr.3359s0141 I
Bostr.7867s1529 Boechera stricta Bostr.7867s1529 I
Bra005335 Brassica rapa Bra005335 I
Bra010572 Brassica rapa Bra010572 I
Bra011701 Brassica rapa Bra011701 I
BRADI1G54180 Brachypodium distachyon BRADI1G54180 I
BRADI2G15940 Brachypodium distachyon BRADI2G15940 I
BRADI2G45567 Brachypodium distachyon BRADI2G45567 I
BRADI4G39630 Brachypodium distachyon BRADI4G39630 I
BZIP16 Arabidopsis thaliana AT2G35530 D
BZIP68 Arabidopsis thaliana AT1G32150 D
bZIP68 Arabidopsis lyrata fgenesh2_kg.1__3350__AT1G32150.1 I
Cagra.0993s0063 Capsella grandiflora Cagra.0993s0063 I
Cagra.3359s0011 Capsella grandiflora Cagra.3359s0011 I
Cagra.5996s0003 Capsella grandiflora Cagra.5996s0003 I
Carubv10005287m.g Capsella rubella Carubv10005287m.g I
cassava11837.valid.m1 Manihot esculenta cassava11837.valid.m1 I
cassava37043.valid.m1 Manihot esculenta cassava37043.valid.m1 I
cassava43569.valid.m1 Manihot esculenta cassava43569.valid.m1 I
cassava43570.valid.m1 Manihot esculenta cassava43570.valid.m1 I
cassava43571.valid.m1 Manihot esculenta cassava43571.valid.m1 I
cassava45491.m1 Manihot esculenta cassava45491.m1 I
cassava46468.m1 Manihot esculenta cassava46468.m1 I
Ca_01293 Cicer arietinum Ca_01293 I
Ca_11455 Cicer arietinum Ca_11455 I
Ca_15839 Cicer arietinum Ca_15839 I
Ca_17787 Cicer arietinum Ca_17787 I
chr1.CM0579.280.nd Lotus japonicus chr1.CM0579.280.nd I
chr2.LjT41P23.50.nc Lotus japonicus chr2.LjT41P23.50.nc I
Ciclev10001333m.g Citrus clementina Ciclev10001333m.g I
Ciclev10020314m.g Citrus clementina Ciclev10020314m.g I
Ciclev10025963m.g Citrus clementina Ciclev10025963m.g I
Cla008988 Citrullus lanatus Cla008988 I
Cla014415 Citrullus lanatus Cla014415 I
Cla016502 Citrullus lanatus Cla016502 I
Cucsa.104970 Cucumis sativus Cucsa.104970 I
Cucsa.312800 Cucumis sativus Cucsa.312800 I
Cucsa.322110 Cucumis sativus Cucsa.322110 I
estExt_fgenesh1_pg.C_10522 Micromonas pusilla estExt_fgenesh1_pg.C_10522 I
estExt_fgenesh2_pg.C_Chr_020452 Micromonas sp RCC299 estExt_fgenesh2_pg.C_Chr_020452 I
Eucgr.E00078 Eucalyptus grandis Eucgr.E00078 I
Eucgr.E00223 Eucalyptus grandis Eucgr.E00223 I
Eucgr.H01256 Eucalyptus grandis Eucgr.H01256 I
evm.TU.supercontig_158.7 Carica papaya evm.TU.supercontig_158.7 I
evm.TU.supercontig_2741.1 Carica papaya evm.TU.supercontig_2741.1 I
F775_07803 Aegilops tauschii F775_07803 I
F775_32205 Aegilops tauschii F775_32205 I
fgeneshCV_pg.C_scaffold_12000127 Chlorella vulgaris fgeneshCV_pg.C_scaffold_12000127 I
GBF1 Arabidopsis thaliana AT4G36730 D
GBF1 Arabidopsis lyrata scaffold_700433.1 I
GBF1 Vitis vinifera VIT_04s0023g01360 I
GBF2 Arabidopsis thaliana AT4G01120 D
gene13716-v1.0-hybrid Fragaria vesca gene13716-v1.0-hybrid I
gene18928-v1.0-hybrid Fragaria vesca gene18928-v1.0-hybrid I
gene29546-v1.0-hybrid Fragaria vesca gene29546-v1.0-hybrid I
Genemark1.5055_g Coccomyxa subellipsoidea C169 Genemark1.5055_g I
GLYMA01G01740 Glycine max GLYMA01G01740 I
GLYMA01G38381 Glycine max GLYMA01G38381 I
GLYMA02G06550 Glycine max GLYMA02G06550 I
GLYMA03G41590 Glycine max GLYMA03G41590 I
GLYMA07G06620 Glycine max GLYMA07G06620 I
GLYMA08G34280 Glycine max GLYMA08G34280 I
GLYMA09G34170 Glycine max GLYMA09G34170 I
GLYMA16G03190 Glycine max GLYMA16G03190 I
GLYMA16G15810 Glycine max GLYMA16G15810 I
GLYMA16G25600 Glycine max GLYMA16G25600 I
GLYMA19G44190 Glycine max GLYMA19G44190 I
Gorai.003G185700 Gossypium raimondii Gorai.003G185700 I
Gorai.004G153100 Gossypium raimondii Gorai.004G153100 I
Gorai.004G181900 Gossypium raimondii Gorai.004G181900 I
Gorai.007G105100 Gossypium raimondii Gorai.007G105100 I
Gorai.007G205700 Gossypium raimondii Gorai.007G205700 I
Gorai.008G068900 Gossypium raimondii Gorai.008G068900 I
Gorai.008G123200 Gossypium raimondii Gorai.008G123200 I
GRMZM2G011932 Zea mays GRMZM2G011932 I
GRMZM2G019106 Zea mays GRMZM2G019106 I
GRMZM2G074373 Zea mays GRMZM2G074373 I
GRMZM2G088140 Zea mays GRMZM2G088140 I
GRMZM2G095078 Zea mays GRMZM2G095078 I
GRMZM2G117851 Zea mays GRMZM2G117851 I
GRMZM2G153144 Zea mays GRMZM2G153144 I
GRMZM2G160136 Zea mays GRMZM2G160136 I
GRMZM2G171370 Zea mays GRMZM2G171370 I
GRMZM2G358701 Zea mays GRMZM2G358701 I
GRMZM5G848942 Zea mays GRMZM5G848942 I
GSMUA_Achr4G04530_001 Musa acuminata GSMUA_Achr4G04530_001 I
GSMUA_Achr4G11610_001 Musa acuminata GSMUA_Achr4G11610_001 I
GSMUA_Achr4G18980_001 Musa acuminata GSMUA_Achr4G18980_001 I
GSMUA_Achr4G33130_001 Musa acuminata GSMUA_Achr4G33130_001 I
GSMUA_Achr5G14150_001 Musa acuminata GSMUA_Achr5G14150_001 I
GSMUA_Achr9G05310_001 Musa acuminata GSMUA_Achr9G05310_001 I
gw1.27.125.1 Physcomitrella patens gw1.27.125.1 I
gw1.3.298.1 Physcomitrella patens gw1.3.298.1 I
gw1.33.173.1 Physcomitrella patens gw1.33.173.1 I
gw1.8.536.1 Micromonas pusilla gw1.8.536.1 I
gw2.11.550.1 Micromonas sp RCC299 gw2.11.550.1 I
HBP1A_WHEAT Triticum aestivum HBP1A_WHEAT D
LjSGA_036158.1 Lotus japonicus LjSGA_036158.1 I
LPERR01G21580 Leersia perrieri LPERR01G21580 I
LPERR05G21930 Leersia perrieri LPERR05G21930 I
LPERR07G06120 Leersia perrieri LPERR07G06120 I
LPERR12G05920 Leersia perrieri LPERR12G05920 I
Lus10003034.g Linum usitatissimum Lus10003034.g I
Lus10005146.g Linum usitatissimum Lus10005146.g I
Lus10014324.g Linum usitatissimum Lus10014324.g I
Lus10026033.g Linum usitatissimum Lus10026033.g I
MDP0000138052 Malus domestica MDP0000138052 I
MDP0000185553 Malus domestica MDP0000185553 I
MDP0000231274 Malus domestica MDP0000231274 I
MDP0000286846 Malus domestica MDP0000286846 I
MDP0000493795 Malus domestica MDP0000493795 I
MDP0000545420 Malus domestica MDP0000545420 I
mgf000639m Mimulus guttatus mgf000639m I
mgf003302m Mimulus guttatus mgf003302m I
mgf005151m Mimulus guttatus mgf005151m I
mgf008195m Mimulus guttatus mgf008195m I
mgf008605m Mimulus guttatus mgf008605m I
mgf013423m Mimulus guttatus mgf013423m I
mgf014804m Mimulus guttatus mgf014804m I
MLOC_63066 Hordeum vulgare MLOC_63066 I
MLOC_6711 Hordeum vulgare MLOC_6711 I
MLOC_81641 Hordeum vulgare MLOC_81641 I
MTR_5g028850 Medicago truncatula MTR_5g028850 I
MTR_7g116890 Medicago truncatula MTR_7g116890 I
MTR_8g070820 Medicago truncatula MTR_8g070820 I
MTR_8g077950 Medicago truncatula MTR_8g077950 I
OB01G34490 Oryza brachyantha OB01G34490 I
OB02G12150 Oryza brachyantha OB02G12150 I
OB05G33790 Oryza brachyantha OB05G33790 I
OB07G15280 Oryza brachyantha OB07G15280 I
OB12G16310 Oryza brachyantha OB12G16310 I
OBART01G25300 Oryza barthii OBART01G25300 I
OBART05G26280 Oryza barthii OBART05G26280 I
OBART07G07070 Oryza barthii OBART07G07070 I
OBART12G06770 Oryza barthii OBART12G06770 I
OGLUM01G29060 Oryza glumaepatula OGLUM01G29060 I
OGLUM05G27920 Oryza glumaepatula OGLUM05G27920 I
OGLUM07G06770 Oryza glumaepatula OGLUM07G06770 I
OGLUM12G08090 Oryza glumaepatula OGLUM12G08090 I
OLONG_003667 Oryza longistaminata OLONG_003667 I
OLONG_021599 Oryza longistaminata OLONG_021599 I
OLONG_021967 Oryza longistaminata OLONG_021967 I
OLONG_022047 Oryza longistaminata OLONG_022047 I
OMERI01G23000 Oryza meridionalis OMERI01G23000 I
OMERI03G30340 Oryza meridionalis OMERI03G30340 I
OMERI07G05820 Oryza meridionalis OMERI07G05820 I
OMERI12G04560 Oryza meridionalis OMERI12G04560 I
ONIVA01G28540 Oryza nivara ONIVA01G28540 I
ONIVA02G02170 Oryza nivara ONIVA02G02170 I
ONIVA05G28290 Oryza nivara ONIVA05G28290 I
ONIVA07G05320 Oryza nivara ONIVA07G05320 I
ONIVA12G06500 Oryza nivara ONIVA12G06500 I
OPUNC01G25140 Oryza punctata OPUNC01G25140 I
OPUNC02G01690 Oryza punctata OPUNC02G01690 I
OPUNC05G23850 Oryza punctata OPUNC05G23850 I
OPUNC07G06790 Oryza punctata OPUNC07G06790 I
OPUNC12G06450 Oryza punctata OPUNC12G06450 I
orange1.1g014660m.g Citrus sinensis orange1.1g014660m.g I
orange1.1g018605m.g Citrus sinensis orange1.1g018605m.g I
orange1.1g036551m.g Citrus sinensis orange1.1g036551m.g I
ORGLA01G0206000 Oryza glaberrima ORGLA01G0206000 I
ORGLA02G0021500 Oryza glaberrima ORGLA02G0021500 I
ORGLA05G0227800 Oryza glaberrima ORGLA05G0227800 I
ORGLA12G0063500 Oryza glaberrima ORGLA12G0063500 I
ORUFI01G28110 Oryza rufipogon ORUFI01G28110 I
ORUFI05G28170 Oryza rufipogon ORUFI05G28170 I
ORUFI07G07050 Oryza rufipogon ORUFI07G07050 I
ORUFI12G07600 Oryza rufipogon ORUFI12G07600 I
OS01G0658900 Oryza sativa OS01G0658900 I
OS02G0128200 Oryza sativa OS02G0128200 I
OS05G0569300 Oryza sativa OS05G0569300 I
OS07G0209800 Oryza sativa OS07G0209800 I
Pavir.Aa03436 Panicum virgatum Pavir.Aa03436 I
Pavir.Ab00132 Panicum virgatum Pavir.Ab00132 I
Pavir.Ba03287 Panicum virgatum Pavir.Ba03287 I
Pavir.Bb00931 Panicum virgatum Pavir.Bb00931 I
Pavir.Ca00403 Panicum virgatum Pavir.Ca00403 I
Pavir.Cb01814 Panicum virgatum Pavir.Cb01814 I
Pavir.Ea02315 Panicum virgatum Pavir.Ea02315 I
PDK_20s1310372g001 Phoenix dactylifera PDK_20s1310372g001 I
PDK_20s1348391g002 Phoenix dactylifera PDK_20s1348391g002 I
PDK_20s1349941g001 Phoenix dactylifera PDK_20s1349941g001 I
PDK_20s1368181g001 Phoenix dactylifera PDK_20s1368181g001 I
PDK_20s1372692g002 Phoenix dactylifera PDK_20s1372692g002 I
PDK_20s1568831g001 Phoenix dactylifera PDK_20s1568831g001 I
PDK_20s1708971g001 Phoenix dactylifera PDK_20s1708971g001 I
PGSC0003DMG400012660 Solanum tuberosum PGSC0003DMG400012660 I
PGSC0003DMG400018469 Solanum tuberosum PGSC0003DMG400018469 I
PGSC0003DMG400033876 Solanum tuberosum PGSC0003DMG400033876 I
PK09653.1 Cannabis sativa PK09653.1 D
PK23964.1 Cannabis sativa PK23964.1 D
Pm018422 Prunus mume Pm018422 I
Pm023132 Prunus mume Pm023132 I
Pm026586 Prunus mume Pm026586 I
POPTR_0001s01840 Populus trichocarpa POPTR_0001s01840 I
POPTR_0002s16870 Populus trichocarpa POPTR_0002s16870 I
POPTR_0003s09630 Populus trichocarpa POPTR_0003s09630 I
POPTR_0005s12750 Populus trichocarpa POPTR_0005s12750 I
POPTR_0007s12460 Populus trichocarpa POPTR_0007s12460 I
PRUPE_ppa006173mg Prunus persica PRUPE_ppa006173mg I
PRUPE_ppa006484mg Prunus persica PRUPE_ppa006484mg I
PRUPE_ppa008024mg Prunus persica PRUPE_ppa008024mg I
Q40645_ORYSA Oryza sativa Q40645_ORYSA D
Q41109_PHAVU Phaseolus vulgaris Q41109_PHAVU D
SapurV1A.0013s0770 Salix purpurea SapurV1A.0013s0770 I
SapurV1A.0051s0250 Salix purpurea SapurV1A.0051s0250 I
SapurV1A.0063s0130 Salix purpurea SapurV1A.0063s0130 I
SapurV1A.0255s0070 Salix purpurea SapurV1A.0255s0070 I
SapurV1A.0817s0110 Salix purpurea SapurV1A.0817s0110 I
Sb02g006350 Sorghum bicolor Sb02g006350 I
Sb03g030050 Sorghum bicolor Sb03g030050 I
Sb04g002360 Sorghum bicolor Sb04g002360 I
Sb08g008300 Sorghum bicolor Sb08g008300 I
Sb09g028990 Sorghum bicolor Sb09g028990 I
SELMODRAFT_125734 Selaginella moellendorffii SELMODRAFT_125734 I
SELMODRAFT_129391 Selaginella moellendorffii SELMODRAFT_129391 I
SELMODRAFT_135978 Selaginella moellendorffii SELMODRAFT_135978 I
Si001929m.g Setaria italica Si001929m.g I
Si017637m.g Setaria italica Si017637m.g I
Si022325m.g Setaria italica Si022325m.g I
Si022388m.g Setaria italica Si022388m.g I
Si030123m.g Setaria italica Si030123m.g I
Solyc02g062950.2 Solanum lycopersicum Solyc02g062950.2 I
Solyc02g085610.2 Solanum lycopersicum Solyc02g085610.2 I
Solyc05g050220.2 Solanum lycopersicum Solyc05g050220.2 I
Solyc08g005290.2 Solanum lycopersicum Solyc08g005290.2 I
Solyc08g076100.2 Solanum lycopersicum Solyc08g076100.2 I
TAF1_TOBAC Nicotiana tabacum TAF1_TOBAC D
TCM_000436 Theobroma cacao TCM_000436 I
TCM_005210 Theobroma cacao TCM_005210 I
TCM_016606 Theobroma cacao TCM_016606 I
Thhalv10007879m.g Eutrema salsugineum Thhalv10007879m.g I
Thhalv10016740m.g Eutrema salsugineum Thhalv10016740m.g I
Thhalv10025733m.g Eutrema salsugineum Thhalv10025733m.g I
Traes_1AL_F18EC96DF Triticum aestivum Traes_1AL_F18EC96DF I
Traes_1BL_C5FEAF06E Triticum aestivum Traes_1BL_C5FEAF06E I
Traes_1DL_23D036A85 Triticum aestivum Traes_1DL_23D036A85 I
Traes_2BL_245DDBC7B Triticum aestivum Traes_2BL_245DDBC7B I
Traes_5AS_3A85F1C2C Triticum aestivum Traes_5AS_3A85F1C2C I
Traes_5BL_A5532B750 Triticum aestivum Traes_5BL_A5532B750 I
Traes_5BS_A5532B750 Triticum aestivum Traes_5BS_A5532B750 I
Traes_5DL_C794C1EEA Triticum aestivum Traes_5DL_C794C1EEA I
Traes_6BS_05264DAEA Triticum aestivum Traes_6BS_05264DAEA I
TRIUR3_18117 Triticum urartu TRIUR3_18117 I
TRIUR3_18341 Triticum urartu TRIUR3_18341 I
TRIUR3_31142 Triticum urartu TRIUR3_31142 I
TRIUR3_34165 Triticum urartu TRIUR3_34165 I
VIT_02s0012g02250 Vitis vinifera VIT_02s0012g02250 I
VIT_18s0001g12120 Vitis vinifera VIT_18s0001g12120 I