EFV57464 (Trichinella spiralis)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 EFV57464 T206558_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.685 0.500
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.685 0.500
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.685 0.500
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.685 0.500
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.685 0.500
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.685 0.500
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.685 0.500
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.685 0.500
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.685 0.500
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.675 0.326
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.675 0.326
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.675 0.326
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFV57464 Homeodomain 146 191

Links

Other Homeodomain family TFs
Other Trichinella spiralis TFs

1107 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG017936.1 Alligator sinensis Alligator_sinensis_CCG017936.1 I 0.000
Cmyd_10005916 Chelonia mydas Cmyd_10005916 I 0.000
ENSACAG00000016965 Anolis carolinensis ENSACAG00000016965 I 0.000
ENSAMEG00000010478 Ailuropoda melanoleuca ENSAMEG00000010478 I 0.000
ENSAMXG00000005448 Astyanax mexicanus ENSAMXG00000005448 I 0.000
ENSCSAG00000006753 Chlorocebus sabaeus ENSCSAG00000006753 I 0.000
ENSMMUP00000027145 Macaca fascicularis ENSMMUP00000027145 I 0.000
ENSMPUG00000005002 Mustela putorius furo ENSMPUG00000005002 I 0.000
ENSNLEG00000012591 Nomascus leucogenys ENSNLEG00000012591 I 0.000
ENSOANG00000012102 Ornithorhynchus anatinus ENSOANG00000012102 I 0.000
ENSONIG00000008038 Oreochromis niloticus ENSONIG00000008038 I 0.000
ENSPANG00000016446 Papio anubis ENSPANG00000016446 I 0.000
ENSPFOG00000003530 Poecilia formosa ENSPFOG00000003530 I 0.000
ENSPPYG00000009584 Pongo abelii ENSPPYG00000009584 I 0.000
ENSSTOG00000003640 Ictidomys tridecemlineatus ENSSTOG00000003640 I 0.000
Myotis_brandtii_Znf653_10003855 Myotis brandtii Myotis_brandtii_Znf653_10003855 I 0.000
Ogr06398 Ophisaurus gracilis Ogr06398 I 0.000
Pvit_14576 Pogona vitticeps Pvit_14576 I 0.000
Zfp653 Mus musculus ENSMUSG00000038895 I 0.000
Zfp653 Rattus norvegicus ENSRNOG00000014065 I 0.000
ZNF653 Pan troglodytes ENSPTRG00000010507 I 0.000
ZNF653 Bos taurus ENSBTAG00000014415 I 0.000
ZNF653 Callithrix jacchus ENSCJAG00000005551 I 0.000
ZNF653 Cavia porcellus ENSCPOG00000010842 I 0.000
ZNF653 Tursiops truncatus ENSTTRG00000001794 I 0.000
ZNF653 Sus scrofa ENSSSCG00000013616 I 0.000
ZNF653 Pteropus vampyrus ENSPVAG00000014895 I 0.000
ZNF653 Macaca mulatta ENSMMUG00000020617 I 0.000
znf653 Oryzias latipes ENSORLG00000016563 I 0.000
znf653 Danio rerio ENSDARG00000093469 I 0.000
ZNF653 Otolemur garnettii ENSOGAG00000007074 I 0.000
ZNF653 Felis catus ENSFCAG00000004922 I 0.000
ZNF653 Homo sapiens ENSG00000161914 D 0.000
ZNF653 Myotis lucifugus ENSMLUG00000016337 I 0.000