Hnf1a (Dipodomys ordii)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSDORG00000007676 T208988_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HNF1A
M03150_2.00 		Homo sapiens
NGTTAATNATTAAYN
NRTTAATNATTAACN		 SELEX
Jolma et al.(2013)
HNF1A_1 		0.867 1.000
HNF1A
M09144_2.00 		Homo sapiens
DGTTAATKATTAACH
DGTTAATMATTAACH		 Misc
Kulakovskiy et al.(2013)
HNF1A_HUMAN.H11MO.0.C 		0.867 1.000
HNF1A
M10690_2.00 		Homo sapiens
RGTTAATDWTTRMHV
BDKYAAWHATTAACY		 Transfac
Matys et al.(2006)
V$HNF1_01 		0.867 1.000
HNF1A
M10691_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1A_Q4 		0.867 1.000
HNF1A
M10692_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1A_Q5 		0.867 1.000
HNF1A
M10693_2.00 		Homo sapiens
DGBTAATBAWTHAMYWM
KWRKTDAWTVATTAVCH		 Transfac
Matys et al.(2006)
V$HNF1_C 		0.867 1.000
Hnf1b
M00408_2.00 		Mus musculus
NNHWCNNN
NNNGWDNN		 PBM
Berger et al.(2008)
Tcf2_0913 		0.866 0.945
HNF1B
M03245_2.00 		Homo sapiens
GTTAATNATTAAY
RTTAATNATTAAC		 SELEX
Jolma et al.(2013)
HNF1B_1 		0.866 0.945
HNF1B
M03246_2.00 		Homo sapiens
NGTTAATNATTAAYN
NRTTAATNATTAACN		 SELEX
Jolma et al.(2013)
HNF1B_2 		0.866 0.945
HNF1B
M09168_2.00 		Homo sapiens
DGTTAATRATTAACH
DGTTAATYATTAACH		 Misc
Kulakovskiy et al.(2013)
HNF1B_HUMAN.H11MO.0.A 		0.866 0.945
Hnf1b
M09179_2.00 		Mus musculus
DGTTAATRATTAACH
DGTTAATYATTAACH		 Misc
Kulakovskiy et al.(2013)
HNF1B_MOUSE.H11MO.0.A 		0.866 0.945
HNF1B
M10758_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1B_Q6_01 		0.866 0.945
HNF1B
M10759_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF1B_Q6 		0.866 0.945
HNF1B
M10760_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LFA1_Q6 		0.866 0.945
Hnf1a
M00171_2.00 		Mus musculus
HTAAYYNN
NNRRTTAD		 PBM
Badis et al.(2009)
Tcf1_2666 		0.860 0.982
Hnf1a
M00444_2.00 		Mus musculus
HTAAYYNNN
NNNRRTTAD		 PBM
Berger et al.(2008)
Tcf1_2666 		0.860 0.982
Hnf1a
M09191_2.00 		Mus musculus
RGTTAATNWTTDMHN
NDKHAAWNATTAACY		 Misc
Kulakovskiy et al.(2013)
HNF1A_MOUSE.H11MO.0.A 		0.860 0.982
Hmbox1
M00419_2.00 		Mus musculus
NNNGWNNN
NNNWCNNN		 PBM
Berger et al.(2008)
Hmbox1_2674 		0.638 0.382
HMBOX1
M03167_2.00 		Homo sapiens
BKTAACTARB
VYTAGTTAMV		 SELEX
Jolma et al.(2013)
HMBOX1_1 		0.638 0.382
HMBOX1
M05180_2.00 		Homo sapiens
BTAACYAGB
VCTRGTTAV		 SELEX
Yin et al.(2017)
HMBOX1_eDBD_HT-SELEX 		0.638 0.382
HMBOX1
M05181_2.00 		Homo sapiens
NTAACTAGB
VCTAGTTAN		 SELEX
Yin et al.(2017)
HMBOX1_eDBD_Methyl-HT-SELEX 		0.638 0.382
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000007192 Homeodomain 91 166

Links

Other Homeodomain family TFs
Other Dipodomys ordii TFs

210 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O9_12743 Exophiala aquamarina A1O9_12743 N 0.000
CADAFLAG00000379 Aspergillus flavus CADAFLAG00000379 N 0.000
CADANGAG00006610 Aspergillus niger CADANGAG00006610 N 0.000
CADANGAG00012414 Aspergillus niger CADANGAG00012414 N 0.000
CFIO01_05872 Colletotrichum fioriniae CFIO01_05872 N 0.000
CH063_13215 Colletotrichum higginsianum CH063_13215 N 0.000
Cob_05129 Colletotrichum orbiculare Cob_05129 N 0.000
e_gw1.00815.93.1 Aspergillus carbonarius e_gw1.00815.93.1 N 0.000
FFUJ_14523 Fusarium fujikuroi FFUJ_14523 N 0.000
gw1.00083.300.1 Aspergillus carbonarius gw1.00083.300.1 N 0.000
M438DRAFT_99004 Aureobasidium pullulans M438DRAFT_99004 N 0.000
OIDMADRAFT_193465 Oidiodendron maius OIDMADRAFT_193465 N 0.000
PMAA_001430 Penicillium marneffei PMAA_001430 N 0.000
PMAA_001430 Talaromyces marneffei PMAA_001430 N 0.000
PV06_05937 Exophiala oligosperma PV06_05937 N 0.000
PV08_11912 Exophiala spinifera PV08_11912 N 0.000
PVAR5_2965 Byssochlamys spectabilis PVAR5_2965 N 0.000
SBOR_2893 Sclerotinia borealis SBOR_2893 N 0.000
sr16602 Sporisorium reilianum sr16602 N 0.000
SS1G_02247 Sclerotinia sclerotiorum SS1G_02247 N 0.000
U727_00430149351 Penicillium solitum U727_00430149351 N 0.000
X797_005153 Metarhizium robertsii X797_005153 N 0.000