CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSFALG00000004050
(
Ficedula albicollis
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSFALG00000004050
T209496_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.867
0.991
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.867
0.991
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFALP00000004219
Homeodomain
36
94
NLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
ENSFALP00000004219
Homeodomain
488
547
QDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRL
Links
Other
Homeodomain
family TFs
Other
Ficedula albicollis
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw1.40.162.1
Nectria haematococca
e_gw1.40.162.1
N
FGRRES_04862
Fusarium graminearum
FGRRES_04862
N
GLRG_08625
Colletotrichum graminicola
GLRG_08625
N
MAJ_05659
Metarhizium majus
MAJ_05659
N
MGU_07366
Metarhizium guizhouense
MGU_07366
N
NechaG52907
Fusarium solani
NechaG52907
N
OIDMADRAFT_170284
Oidiodendron maius
OIDMADRAFT_170284
N
S40285_03321
Stachybotrys chlorohalonata
S40285_03321
N
TRIVIDRAFT_28818
Trichoderma virens
TRIVIDRAFT_28818
N
VHEMI02167
Torrubiella hemipterigena
VHEMI02167
N
VHEMI10245
Torrubiella hemipterigena
VHEMI10245
N
Z519_10035
Cladophialophora bantiana
Z519_10035
N