CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDX
(
Gorilla gorilla
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSGGOG00000005551
T210405_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.867
1.000
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.867
0.991
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000005436
Homeodomain
2
60
NLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
ENSGGOP00000005436
Homeodomain
437
496
QDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVATELNVDCEIVRTWIGNRRRKYRL
Links
Other
Homeodomain
family TFs
Other
Gorilla gorilla
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB06014.1
Alternaria brassicicola
AB06014.1
N
0.000
ACRE_080260
Acremonium chrysogenum
ACRE_080260
N
0.000
COCC4DRAFT_153628
Bipolaris maydis
COCC4DRAFT_153628
N
0.000
COCC4DRAFT_192656
Bipolaris maydis
COCC4DRAFT_192656
N
0.000
COCCADRAFT_32473
Bipolaris zeicola
COCCADRAFT_32473
N
0.000
COCCADRAFT_88055
Bipolaris zeicola
COCCADRAFT_88055
N
0.000
COCSADRAFT_222162
Bipolaris sorokiniana
COCSADRAFT_222162
N
0.000
COCVIDRAFT_95275
Bipolaris victoriae
COCVIDRAFT_95275
N
0.000
COCVIDRAFT_99703
Bipolaris victoriae
COCVIDRAFT_99703
N
0.000
estExt_Genewise1Plus.C_120307
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_120307
N
0.000
FFUJ_08424
Fusarium fujikuroi
FFUJ_08424
N
0.000
fgenesh1_pg.sca_12_chr5_2_0000282
Nectria haematococca
fgenesh1_pg.sca_12_chr5_2_0000282
N
0.000
FPSE_08824
Fusarium pseudograminearum
FPSE_08824
N
0.000
NechaG80102
Fusarium solani
NechaG80102
N
0.000
OIDMADRAFT_45112
Oidiodendron maius
OIDMADRAFT_45112
N
0.000
Pc13g06530
Penicillium chrysogenum
Pc13g06530
N
0.000
PCH_Pc13g06530
Penicillium rubens
PCH_Pc13g06530
N
0.000
PEX1_099950
Penicillium expansum
PEX1_099950
N
0.000
PITC_065540
Penicillium italicum
PITC_065540
N
0.000
PTRG_03745
Pyrenophora triticirepentis
PTRG_03745
N
0.000
PTT_10272
Pyrenophora teres
PTT_10272
N
0.000
SNOG_01611
Phaeosphaeria nodorum
SNOG_01611
N
0.000
SNOG_01611
Stagonospora nodorum
SNOG_01611
N
0.000
TRIVIDRAFT_149245
Trichoderma virens
TRIVIDRAFT_149245
N
0.000
TRIVIDRAFT_189391
Trichoderma virens
TRIVIDRAFT_189391
N
0.000
U727_00430311331
Penicillium solitum
U727_00430311331
N
0.000
V499_04467
Pseudogymnoascus pannorum
V499_04467
N
0.000
VDAG_10012
Verticillium dahliae
VDAG_10012
N
0.000