LHX9 (Monodelphis domestica)
Homeodomain

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00046 (Homeobox) IPR001356 ENSMODG00000012746 T212158_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VAX1
M03168_2.00 		Homo sapiens
YTAATKAN
NTMATTAR		 SELEX
Jolma et al.(2013)
VAX1_1 		0.745 0.267
VAX1
M05182_2.00 		Homo sapiens
BTAATTRN
NYAATTAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_HT-SELEX 		0.745 0.267
VAX1
M05183_2.00 		Homo sapiens
BTMATKRN
NYMATKAV		 SELEX
Yin et al.(2017)
VAX1_eDBD_Methyl-HT-SELEX 		0.745 0.267
VSX1
M03087_2.00 		Homo sapiens
YTAATTAN
NTAATTAR		 SELEX
Jolma et al.(2013)
VSX1_1 		0.739 0.378
VSX1
M03088_2.00 		Homo sapiens
NNYAATTRRBN
NVYYAATTRNN		 SELEX
Jolma et al.(2013)
VSX1_2 		0.739 0.378
VSX1
M04941_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_HT-SELEX 		0.739 0.378
VSX1
M04944_2.00 		Homo sapiens
NTAATTRS
SYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_HT-SELEX 		0.739 0.378
VSX1
M05869_2.00 		Homo sapiens
DGCTAATTAN
NTAATTAGCH		 SMiLE-seq
Isakova et al.(2017)
VSX1 		0.739 0.378
VSX1
M04942_2.00 		Homo sapiens
NTAAYGMN
NKCRTTAN		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_1 		0.739 0.378
VSX1
M04943_2.00 		Homo sapiens
YYAATTRN
NYAATTRR		 SELEX
Yin et al.(2017)
VSX1_eDBD_Methyl-HT-SELEX_2 		0.739 0.378
VSX1
M04945_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_1 		0.739 0.378
VSX1
M04946_2.00 		Homo sapiens
NTAAYGAN
NTCRTTAN		 SELEX
Yin et al.(2017)
VSX1_FL_Methyl-HT-SELEX_2 		0.739 0.378
LHX2
M02085_2.00 		Homo sapiens
NNNYAAHDDN
NHHDTTRNNN		 PBM
Weirauch et al.(2014)
pTH5812 		0.360 1.000
Lhx2
M00380_2.00 		Mus musculus
NTAATKRN
NYMATTAN		 PBM
Berger et al.(2008)
Lhx2_0953 		0.360 1.000
Lhx9
M00406_2.00 		Mus musculus
NTAATDRN
NYHATTAN		 PBM
Berger et al.(2008)
Lhx9_3492 		0.360 1.000
LHX2
M03106_2.00 		Homo sapiens
NNTAATTAGN
NCTAATTANN		 SELEX
Jolma et al.(2013)
LHX2_1 		0.360 1.000
LHX2
M03107_2.00 		Homo sapiens
YAATTANVCTAATTR
YAATTAGBNTAATTR		 SELEX
Jolma et al.(2013)
LHX2_2 		0.360 1.000
LHX9
M03163_2.00 		Homo sapiens
NTAATTRN
NYAATTAN		 SELEX
Jolma et al.(2013)
LHX9_1 		0.360 1.000
LHX9
M03164_2.00 		Homo sapiens
TAATTRGYMATTA
TAATKRCYAATTA		 SELEX
Jolma et al.(2013)
LHX9_2 		0.360 1.000
LHX9
M05170_2.00 		Homo sapiens
YTAATTRG
CYAATTAR		 SELEX
Yin et al.(2017)
LHX9_eDBD_HT-SELEX 		0.360 1.000
LHX9
M05173_2.00 		Homo sapiens
NTAATTRG
CYAATTAN		 SELEX
Yin et al.(2017)
LHX9_FL_HT-SELEX 		0.360 1.000
LHX2
M09136_2.00 		Homo sapiens
NBYTAATTRVNB
VNBYAATTARVN		 Misc
Kulakovskiy et al.(2013)
LHX2_HUMAN.H11MO.0.A 		0.360 1.000
Lhx2
M09169_2.00 		Mus musculus
NNTAATKRGN
NCYMATTANN		 Misc
Kulakovskiy et al.(2013)
LHX2_MOUSE.H11MO.0.A 		0.360 1.000
Lhx2
M09562_2.00 		Mus musculus
NYTAATTA
TAATTARN		 Misc
Heinz et al.(2010)
HFSC-Lhx2_GSE48068 		0.360 1.000
LHX2
M10655_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX2_Q4 		0.360 1.000
LHX2
M10656_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LHX2_Q6 		0.360 1.000
LHX9
M05171_2.00 		Homo sapiens
YTAATTRS
SYAATTAR		 SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_1 		0.360 1.000
LHX9
M05172_2.00 		Homo sapiens
HTAACGAB
VTCGTTAD		 SELEX
Yin et al.(2017)
LHX9_eDBD_Methyl-HT-SELEX_2 		0.360 1.000
LHX9
M05174_2.00 		Homo sapiens
NTAATTRV
BYAATTAN		 SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_1 		0.360 1.000
LHX9
M05175_2.00 		Homo sapiens
HTAACGAB
VTCGTTAD		 SELEX
Yin et al.(2017)
LHX9_FL_Methyl-HT-SELEX_2 		0.360 1.000
For this family, TFs with SR scores > 0.599 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000015947 Homeodomain 259 303

Links

Other Homeodomain family TFs
Other Monodelphis domestica TFs

1216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000002709 Ailuropoda melanoleuca ENSAMEG00000002709 I 0.000
ENSCSAG00000010748 Chlorocebus sabaeus ENSCSAG00000010748 I 0.000
ENSMPUG00000008217 Mustela putorius furo ENSMPUG00000008217 I 0.000
ENSNLEG00000009871 Nomascus leucogenys ENSNLEG00000009871 I 0.000
ENSOARG00000018861 Ovis aries ENSOARG00000018861 I 0.000
ENSPANG00000023839 Papio anubis ENSPANG00000023839 I 0.000
ENSPPYG00000007948 Pongo abelii ENSPPYG00000007948 I 0.000
ENSSTOG00000025336 Ictidomys tridecemlineatus ENSSTOG00000025336 I 0.000
Hes7 Mus musculus ENSMUSG00000023781 D 0.000
HES7 Tursiops truncatus ENSTTRG00000010312 I 0.000
HES7 Sus scrofa ENSSSCG00000017982 I 0.000
Hes7 Rattus norvegicus ENSRNOG00000007391 I 0.000
HES7 Pteropus vampyrus ENSPVAG00000016370 I 0.000
HES7 Pan troglodytes ENSPTRG00000008725 I 0.000
HES7 Otolemur garnettii ENSOGAG00000026608 I 0.000
HES7 Ornithorhynchus anatinus ENSOANG00000022456 I 0.000
HES7 Macaca mulatta ENSMMUG00000019851 I 0.000
HES7 Myotis lucifugus ENSMLUG00000008014 I 0.000
HES7 Loxodonta africana ENSLAFG00000002331 I 0.000
HES7 Homo sapiens ENSG00000179111 D 0.000
HES7 Felis catus ENSFCAG00000015190 I 0.000
HES7 Equus caballus ENSECAG00000013278 I 0.000
Hes7 Dipodomys ordii ENSDORG00000003869 I 0.000
HES7 Cavia porcellus ENSCPOG00000012913 I 0.000
HES7 Callithrix jacchus ENSCJAG00000014589 I 0.000
HES7 Bos taurus ENSBTAG00000012436 I 0.000