CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HDX
(
Monodelphis domestica
)
Homeodomain
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00046 (Homeobox)
IPR001356
ENSMODG00000014307
T212163_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HDX
M01246_2.00
Homo sapiens
HNNNNNN
NNNNNND
PBM
Lambert et al.(2019)
pTH11271
0.867
0.991
Hdx
M00463_2.00
Mus musculus
HNWYHNN
NNDRWND
PBM
Berger et al.(2008)
Hdx_3845
0.867
0.991
For this family, TFs with SR scores >
0.599
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMODP00000017880
Homeodomain
2
60
NLRSVFTVEQQRILQRYYENGMTNQSKNCFQLILQCAQETKLDFSVVRTWVGNKRRKMS
ENSMODP00000017880
Homeodomain
441
500
QDRTQFSDRDLATLKKYWDNGMTSLGSVCREKIEAVAAELNVDCEIVRTWIGNRRRKYRL
Links
Other
Homeodomain
family TFs
Other
Monodelphis domestica
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AGR172W
Ashbya gossypii
AGOS_AGR172W
N
0.000
CAGL0E04884g
Candida glabrata
CAGL0E04884g
N
0.000
HPODL_00650
Ogataea parapolymorpha
HPODL_00650
N
0.000
KNAG_0M00350
Kazachstania naganishii
KNAG_0M00350
I
0.000
Kpol_529p13
Vanderwaltozyma polyspora
Kpol_529p13
N
0.000
KUCA_T00002767001
Kuraishia capsulata
KUCA_T00002767001
I
0.000
NCAS_0B02840
Naumovozyma castellii
NCAS_0B02840
N
0.000
NDAI_0D03240
Naumovozyma dairenensis
NDAI_0D03240
I
0.000
PAS_chr4_0487
Komagataella pastoris
PAS_chr4_0487
I
0.000
SAKL0H12958g
Lachancea kluyveri
SAKL0H12958g
N
0.000
Scas_Contig721.92
Saccharomyces castellii
Scas_Contig721.92
N
0.000
TDEL_0F05500
Torulaspora delbrueckii
TDEL_0F05500
N
0.000
TPHA_0C02160
Tetrapisispora phaffii
TPHA_0C02160
N
0.000
XP_002493922.1
Pichia pastoris
XP_002493922.1
I
0.000
ZBAI_01684
Zygosaccharomyces bailii
ZBAI_01684
N
0.000
ZBAI_09618
Zygosaccharomyces bailii
ZBAI_09618
N
0.000
ZYRO0A09416g
Zygosaccharomyces rouxii
ZYRO0A09416g
N
0.000