CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

HOXA7 *(Ochotona princeps)* Homeodomain
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00046 (Homeobox)	IPR001356	ENSOPRG00000010447	T213769_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Hoxa7 M00476_2.00	Mus musculus	NNWAYNDNN	NNHNRTWNN	PBM Berger et al.(2008) Hoxa7_2668	0.867	1.000
Hoxa7 M00477_2.00	Mus musculus	NYHHYNNNN	NNNNRDDRN	PBM Berger et al.(2008) Hoxa7_3750	0.867	1.000
HOXA7 M05069_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_HT-SELEX	0.867	1.000
Antp M06549_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0166.1	0.867	1.000
Antp M06374_2.00	Drosophila melanogaster	YTTAATKA	TMATTAAR	B1H Zhu et al.(2011) Antp_Cell_FBgn0000095	0.867	1.000
Antp M06375_2.00	Drosophila melanogaster	WTAATW	AATTAW	B1H Zhu et al.(2011) Antp_FlyReg_FBgn0000095	0.867	1.000
Antp M06376_2.00	Drosophila melanogaster	NHTAATKR	YMATTADN	B1H Zhu et al.(2011) Antp_SOLEXA_FBgn0000095	0.867	1.000
Antp M09682_2.00	Drosophila melanogaster	TYTTWATKA	TMATWAARA	Misc Kulakovskiy et al.(2009) Antp	0.867	1.000
Antp M10789_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ANTP_Q6_01	0.867	1.000
HOXA7 M10679_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA7_01	0.867	1.000
HOXA7 M05070_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_1	0.867	1.000
HOXA7 M05071_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA7_eDBD_Methyl-HT-SELEX_2	0.867	1.000
HOXB7 M00334_2.00	Homo sapiens	NBRDNNN	NNNHYVN	PBM Barrera et al.(2016) HOXB7_REF	0.850	0.965
Hoxb7 M00481_2.00	Mus musculus	NNWAYNDN	NHNRTWNN	PBM Berger et al.(2008) Hoxb7_3953	0.850	0.965
HOXB7 M05404_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB7_eDBD_HT-SELEX	0.850	0.965
HOXB7 M05407_2.00	Homo sapiens	BBTAATTRCN	NGYAATTAVV	SELEX Yin et al.(2017) HOXB7_FL_HT-SELEX	0.850	0.965
HOXB7 M09166_2.00	Homo sapiens	MATHAATCAW	WTGATTDATK	Misc Kulakovskiy et al.(2013) HXB7_HUMAN.H11MO.0.C	0.850	0.965
Hoxb7 M09206_2.00	Mus musculus	MATHAATCAW	WTGATTDATK	Misc Kulakovskiy et al.(2013) HXB7_MOUSE.H11MO.0.C	0.850	0.965
HOXB7 M05405_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXB7_eDBD_Methyl-HT-SELEX_1	0.850	0.965
HOXB7 M05406_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB7_eDBD_Methyl-HT-SELEX_2	0.850	0.965
HOXB7 M05408_2.00	Homo sapiens	NNTAATKRCN	NGYMATTANN	SELEX Yin et al.(2017) HOXB7_FL_Methyl-HT-SELEX_1	0.850	0.965
HOXB7 M05409_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB7_FL_Methyl-HT-SELEX_2	0.850	0.965
HOXB7 M00333_2.00	Homo sapiens	NHATWTATTN	NAATAWATDN	PBM Barrera et al.(2016) HOXB7_R189C	0.850	0.947
ftz M03795_2.00	Drosophila melanogaster	WTAATTRC	GYAATTAW	SELEX Nitta et al.(2015) ftz_1	0.840	0.877
ftz M06488_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0225.1	0.840	0.877
ftz M06247_2.00	Drosophila melanogaster	VTTAATKA	TMATTAAB	B1H Zhu et al.(2011) Ftz_Cell_FBgn0001077	0.840	0.877
ftz M06248_2.00	Drosophila melanogaster	TAATKRNH	DNYMATTA	B1H Zhu et al.(2011) ftz_FlyReg_FBgn0001077	0.840	0.877
ftz M06249_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Zhu et al.(2011) Ftz_SOLEXA_FBgn0001077	0.840	0.877
ftz M09679_2.00	Drosophila melanogaster	YTAATKRNN	NNYMATTAR	Misc Kulakovskiy et al.(2009) ftz	0.840	0.877
ftz M10787_2.00	Drosophila melanogaster	CTTAATTRBHBB	VVDVYAATTAAG	Transfac Matys et al.(2006) I$FTZ_01	0.840	0.877
Hoxa6 M00494_2.00	Mus musculus	NWWATKRNN	NNYMATWWN	PBM Berger et al.(2008) Hoxa6_1040	0.835	0.965
HOXA6 M04974_2.00	Homo sapiens	NNTAATKRVN	NBYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_HT-SELEX	0.835	0.965
HOXA6 M04975_2.00	Homo sapiens	NNTAATKRBN	NVYMATTANN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_1	0.835	0.965
HOXA6 M04976_2.00	Homo sapiens	NTAAYGRY	RYCRTTAN	SELEX Yin et al.(2017) HOXA6_eDBD_Methyl-HT-SELEX_2	0.835	0.965
Hoxb6 M00381_2.00	Mus musculus	NNDHNNN	NNNDHNN	PBM Berger et al.(2008) Hoxb6_3428	0.831	0.965
HOXB6 M04999_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXB6_eDBD_HT-SELEX	0.831	0.965
HOXB6 M05000_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_1	0.831	0.965
HOXB6 M05001_2.00	Homo sapiens	NTWATKRB	VYMATWAN	SELEX Yin et al.(2017) HOXB6_eDBD_Methyl-HT-SELEX_2	0.831	0.965
Hoxc6 M00392_2.00	Mus musculus	TTAATTAB	VTAATTAA	PBM Berger et al.(2008) Hoxc6_3954	0.822	0.930
Hoxb8 M00517_2.00	Mus musculus	NWWAYNDNN	NNHNRTWWN	PBM Berger et al.(2008) Hoxb8_3780	0.821	0.842
HOXB8 M05048_2.00	Homo sapiens	NTAATKRM	KYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_HT-SELEX	0.821	0.842
HOXB8 M09141_2.00	Homo sapiens	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_HUMAN.H11MO.0.C	0.821	0.842
Hoxb8 M09214_2.00	Mus musculus	BMATHAATCAA	TTGATTDATKV	Misc Kulakovskiy et al.(2013) HXB8_MOUSE.H11MO.0.C	0.821	0.842
HOXB8 M05049_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_1	0.821	0.842
HOXB8 M05050_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB8_eDBD_Methyl-HT-SELEX_2	0.821	0.842
HOXD8 M03221_2.00	Homo sapiens	VHWAATKWDN	NHWMATTWDB	SELEX Jolma et al.(2013) HOXD8_1	0.821	0.825
HOXD8 M05310_2.00	Homo sapiens	BTAATKRY	RYMATTAV	SELEX Yin et al.(2017) HOXD8_eDBD_HT-SELEX	0.821	0.825
HOXD8 M05311_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_1	0.821	0.825
HOXD8 M05312_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXD8_eDBD_Methyl-HT-SELEX_2	0.821	0.825
CBG00029 M01240_2.00	Caenorhabditis briggsae	ATTAATTA	TAATTAAT	PBM Lambert et al.(2019) pTH11471	0.818	0.754
abd-A M03770_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_1	0.814	0.930
abd-A M03771_2.00	Drosophila melanogaster	NNTAATKRCN	NGYMATTANN	SELEX Nitta et al.(2015) abd-A_2	0.814	0.930
abd-A M06475_2.00	Drosophila melanogaster	TTAATKA	TMATTAA	B1H Mathelier et al.(2014) MA0206.1	0.814	0.930
abd-A M06210_2.00	Drosophila melanogaster	WTWATKDM	KHMATWAW	B1H Zhu et al.(2011) Abd-A_FlyReg_FBgn0000014	0.814	0.930
abd-A M09671_2.00	Drosophila melanogaster	HTAATKRH	DYMATTAD	Misc Kulakovskiy et al.(2009) abd-A	0.814	0.930
abd-A M10778_2.00	Drosophila melanogaster	Transfac license required	Transfac license required	Transfac Matys et al.(2006) I$ABDA_Q6	0.814	0.930
Hoxd8 M00436_2.00	Mus musculus	NNWWYNNN	NNNRWWNN	PBM Berger et al.(2008) Hoxd8_2644	0.809	0.807
Ubx M00558_2.00	Drosophila melanogaster	NWWAYDDNN	NNHHRTWWN	PBM Busser et al.(2012a) Ubx	0.805	0.912
Ubx M03804_2.00	Drosophila melanogaster	NTAATKRH	DYMATTAN	SELEX Nitta et al.(2015) Ubx_1	0.805	0.912
Ubx M06499_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Mathelier et al.(2014) MA0094.2	0.805	0.912
Ubx M06273_2.00	Drosophila melanogaster	NTTAATKR	YMATTAAN	B1H Zhu et al.(2011) Ubx_Cell_FBgn0003944	0.805	0.912
Ubx M06274_2.00	Drosophila melanogaster	TAATKD	HMATTA	B1H Zhu et al.(2011) Ubx_FlyReg_FBgn0003944	0.805	0.912
Ubx M06275_2.00	Drosophila melanogaster	NTTWATKR	YMATWAAN	B1H Zhu et al.(2011) Ubx_SOLEXA_FBgn0003944	0.805	0.912
Ubx M09680_2.00	Drosophila melanogaster	TTAATKR	YMATTAA	Misc Kulakovskiy et al.(2009) Ubx	0.805	0.912
Ubx M10788_2.00	Drosophila melanogaster	NNVNNNNTAATKRNBHNND	HNNDVNYMATTANNNNBNN	Transfac Matys et al.(2006) I$UBX_01	0.805	0.912
HOXB7 M00331_2.00	Homo sapiens	NNNNNNY	RNNNNNN	PBM Barrera et al.(2016) HOXB7_K191R	0.794	0.947
Hoxc8 M00391_2.00	Mus musculus	NNDNYNNNN	NNNNRNHNN	PBM Berger et al.(2008) Hoxc8_3429	0.789	0.825
HOXC8 M04912_2.00	Homo sapiens	NYAATTRN	NYAATTRN	SELEX Yin et al.(2017) HOXC8_FL_HT-SELEX	0.789	0.825
HOXC8 M10636_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXC8_Q3	0.789	0.825
HOXC8 M04913_2.00	Homo sapiens	NYMATKRN	NYMATKRN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_1	0.789	0.825
HOXC8 M04914_2.00	Homo sapiens	NTWAYGRY	RYCRTWAN	SELEX Yin et al.(2017) HOXC8_FL_Methyl-HT-SELEX_2	0.789	0.825
HOXB7 M00332_2.00	Homo sapiens	NDWATATAYN	NRTATATWHN	PBM Barrera et al.(2016) HOXB7_M190L	0.774	0.947
egl-5 M09581_2.00	Caenorhabditis elegans	DWTTWATGGS	SCCATWAAWH	Misc Heinz et al.(2010) cElegans-L3-EGL5_modEncode	0.750	0.579
CBG00023 M02062_2.00	Caenorhabditis briggsae	NWWATKDNNN	NNNHMATWWN	PBM Weirauch et al.(2014) pTH5778	0.750	0.561
Q8I9J5_9BILA M02214_2.00	Spadella cephaloptera	NVTAWTWABN	NVTWAWTABN	PBM Weirauch et al.(2014) pTH6164	0.726	0.684
Scr M03799_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) Scr_1	0.707	0.947
Scr M06496_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0203.1	0.707	0.947
Scr M06266_2.00	Drosophila melanogaster	HVYTAATKA	TMATTARBD	B1H Zhu et al.(2011) Scr_Cell_FBgn0003339	0.707	0.947
Scr M06267_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Scr_SOLEXA_FBgn0003339	0.707	0.947
Hoxa5 M00478_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxa5_3415	0.707	0.930
Hoxb5 M00480_2.00	Mus musculus	NWDWTNNNN	NNNNAWHWN	PBM Berger et al.(2008) Hoxb5_3122	0.707	0.930
HOXB5 M03125_2.00	Homo sapiens	NNKAATKRNN	NNYMATTMNN	SELEX Jolma et al.(2013) HOXB5_1	0.707	0.930
HOXA5 M04968_2.00	Homo sapiens	STAATKRS	SYMATTAS	SELEX Yin et al.(2017) HOXA5_eDBD_HT-SELEX	0.707	0.930
HOXA5 M04971_2.00	Homo sapiens	NTMATKRB	VYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_HT-SELEX	0.707	0.930
HOXB5 M05051_2.00	Homo sapiens	NTAATKRV	BYMATTAN	SELEX Yin et al.(2017) HOXB5_eDBD_HT-SELEX	0.707	0.930
HOXB5 M05054_2.00	Homo sapiens	STMATKAB	VTMATKAS	SELEX Yin et al.(2017) HOXB5_FL_HT-SELEX	0.707	0.930
HOXA5 M10652_2.00	Homo sapiens	NGRDBKBDHNBAVTAATKRRGRDVDDDGSR	YSCHHHBHYCYYMATTABTVNDHVMVHYCN	Transfac Matys et al.(2006) V$HOX13_01	0.707	0.930
HOXA5 M08457_2.00	Homo sapiens	CDBWAATK	MATTWVHG	COMPILED Mathelier et al.(2014) MA0158.1	0.707	0.930
HOXA5 M04969_2.00	Homo sapiens	BTAATKRV	BYMATTAV	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_1	0.707	0.930
HOXA5 M04970_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_eDBD_Methyl-HT-SELEX_2	0.707	0.930
HOXA5 M04972_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_1	0.707	0.930
HOXA5 M04973_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA5_FL_Methyl-HT-SELEX_2	0.707	0.930
HOXB5 M05052_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_1	0.707	0.930
HOXB5 M05053_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXB5_eDBD_Methyl-HT-SELEX_2	0.707	0.930
HOXB5 M05055_2.00	Homo sapiens	NTMATKAB	VTMATKAN	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_1	0.707	0.930
HOXB5 M05056_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB5_FL_Methyl-HT-SELEX_2	0.707	0.930
Hoxc5 M00422_2.00	Mus musculus	NWRATND	HNATYWN	PBM Berger et al.(2008) Hoxc5_2630	0.695	0.895
CBG23031 M01245_2.00	Caenorhabditis briggsae	NTTWATKRNN	NNYMATWAAN	PBM Lambert et al.(2019) pTH11458	0.681	0.526
Hoxb4 M00479_2.00	Mus musculus	NTAATNDNN	NNHNATTAN	PBM Berger et al.(2008) Hoxb4_2627	0.658	0.860
HOXB4 M05343_2.00	Homo sapiens	YTAATKAY	RTMATTAR	SELEX Yin et al.(2017) HOXB4_FL_HT-SELEX	0.658	0.860
HOXB4 M09162_2.00	Homo sapiens	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_HUMAN.H11MO.0.B	0.658	0.860
Hoxb4 M09204_2.00	Mus musculus	YTAATKRS	SYMATTAR	Misc Kulakovskiy et al.(2013) HXB4_MOUSE.H11MO.0.A	0.658	0.860
Hoxb4 M09576_2.00	Mus musculus	TGATDRATKRSN	NSYMATYHATCA	Misc Heinz et al.(2010) ES-Hoxb4_GSE34014	0.658	0.860
HOXB4 M05344_2.00	Homo sapiens	HTAAYGAY	RTCRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_1	0.658	0.860
HOXB4 M05345_2.00	Homo sapiens	HTAAYKAB	VTMRTTAD	SELEX Yin et al.(2017) HOXB4_FL_Methyl-HT-SELEX_2	0.658	0.860
HOXD4 M05273_2.00	Homo sapiens	NTMATKRV	BYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_HT-SELEX	0.650	0.877
HOXD4 M05276_2.00	Homo sapiens	NTAATKRB	VYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_HT-SELEX	0.650	0.877
HOXD4 M05274_2.00	Homo sapiens	NTMATKRN	NYMATKAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_1	0.650	0.877
HOXD4 M05275_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_eDBD_Methyl-HT-SELEX_2	0.650	0.877
HOXD4 M05277_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_1	0.650	0.877
HOXD4 M05278_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXD4_FL_Methyl-HT-SELEX_2	0.650	0.877
Hoxa4 M00383_2.00	Mus musculus	NTAATBDNN	NNHVATTAN	PBM Berger et al.(2008) Hoxa4_3426	0.650	0.860
HOXA4 M05381_2.00	Homo sapiens	NTAATKRY	RYMATTAN	SELEX Yin et al.(2017) HOXA4_eDBD_HT-SELEX	0.650	0.860
HOXA4 M10755_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA4_Q2	0.650	0.860
HOXA4 M05382_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXA4_eDBD_Methyl-HT-SELEX	0.650	0.860
HOXC4 M00330_2.00	Homo sapiens	YTAATTRB	VYAATTAR	PBM Barrera et al.(2016) HOXC4_REF	0.646	0.860
Hoxc4 M00530_2.00	Mus musculus	NWAATNDNN	NNHNATTWN	PBM Berger et al.(2008) Hoxc4_3491	0.646	0.860
HOXC4 M05385_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_HT-SELEX	0.646	0.860
HOXC4 M05386_2.00	Homo sapiens	NTAATKRN	NYMATTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_1	0.646	0.860
HOXC4 M05387_2.00	Homo sapiens	NTAAYGAY	RTCRTTAN	SELEX Yin et al.(2017) HOXC4_FL_Methyl-HT-SELEX_2	0.646	0.860
HOXC4 M00328_2.00	Homo sapiens	YTAATTAB	VTAATTAR	PBM Barrera et al.(2016) HOXC4_N178S	0.646	0.842
Dfd M03784_2.00	Drosophila melanogaster	VNTAAYKRBN	NVYMRTTANB	SELEX Nitta et al.(2015) Dfd_1	0.644	0.842
Dfd M03785_2.00	Drosophila melanogaster	VYTAATKAYN	NRTMATTARB	SELEX Nitta et al.(2015) Dfd_2	0.644	0.842
Dfd M06481_2.00	Drosophila melanogaster	YTAATGA	TCATTAR	B1H Mathelier et al.(2014) MA0186.1	0.644	0.842
Dfd M06226_2.00	Drosophila melanogaster	VYTAATGA	TCATTAAB	B1H Zhu et al.(2011) Dfd_Cell_FBgn0000439	0.644	0.842
Dfd M06227_2.00	Drosophila melanogaster	TTAATKRY	RYMATTAA	B1H Zhu et al.(2011) Dfd_FlyReg_FBgn0000439	0.644	0.842
Dfd M06228_2.00	Drosophila melanogaster	NBTAATKR	YMATTAVN	B1H Zhu et al.(2011) Dfd_SOLEXA_FBgn0000439	0.644	0.842
Dfd M09675_2.00	Drosophila melanogaster	TTAATKRB	VYMATTAA	Misc Kulakovskiy et al.(2009) Dfd	0.644	0.842
Dfd M10784_2.00	Drosophila melanogaster	NNNNRKTAATNNNNNN	NNNNNNATTAMYNNNN	Transfac Matys et al.(2006) I$DFD_01	0.644	0.842
SPU_026099 M02175_2.00	Strongylocentrotus purpuratus	KTAATTRB	VYAATTAM	PBM Weirauch et al.(2014) pTH6140	0.638	0.754
Pdx1 M00446_2.00	Mus musculus	NWRAYNNN	NNNRTYWN	PBM Berger et al.(2008) Ipf1_3815	0.638	0.719
PDX1 M03155_2.00	Homo sapiens	NTAATTRNNNYTAATTRN	NYAATTARNNNYAATTAN	SELEX Jolma et al.(2013) PDX1_1	0.638	0.719
PDX1 M03156_2.00	Homo sapiens	BTAATKRN	NYMATTAV	SELEX Jolma et al.(2013) PDX1_2	0.638	0.719
PDX1 M05161_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_HT-SELEX	0.638	0.719
PDX1 M09147_2.00	Homo sapiens	TGATWGATK	MATCWATCA	Misc Kulakovskiy et al.(2013) PDX1_HUMAN.H11MO.0.A	0.638	0.719
Pdx1 M09192_2.00	Mus musculus	VYTAATGRB	VYCATTARB	Misc Kulakovskiy et al.(2013) PDX1_MOUSE.H11MO.0.B	0.638	0.719
Pdx1 M09571_2.00	Mus musculus	TGATTRATKR	YMATYAATCA	Misc Heinz et al.(2010) Islet-Pdx1_SRA008281	0.638	0.719
PDX1 M10699_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_01	0.638	0.719
PDX1 M10700_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_02	0.638	0.719
PDX1 M10701_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_03	0.638	0.719
PDX1 M10702_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_04	0.638	0.719
PDX1 M10703_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_05	0.638	0.719
PDX1 M10704_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4_01	0.638	0.719
PDX1 M10705_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q4	0.638	0.719
PDX1 M10706_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5_01	0.638	0.719
PDX1 M10707_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q5	0.638	0.719
PDX1 M10708_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$IPF1_Q6	0.638	0.719
PDX1 M05162_2.00	Homo sapiens	HTAAYGAB	VTCRTTAD	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_1	0.638	0.719
PDX1 M05163_2.00	Homo sapiens	YTAATKRB	VYMATTAR	SELEX Yin et al.(2017) PDX1_eDBD_Methyl-HT-SELEX_2	0.638	0.719
Q0N4M8_NEMVE M02166_2.00	Nematostella vectensis	HTAATKAC	GTMATTAD	PBM Weirauch et al.(2014) pTH6215	0.623	0.737
Hoxd3 M00531_2.00	Mus musculus	NTAATNDN	NHNATTAN	PBM Berger et al.(2008) Hoxd3_1742	0.622	0.737
Hoxa3 M00172_2.00	Mus musculus	NTAATKRNNN	NNNYMATTAN	PBM Badis et al.(2009) Hoxa3_2783	0.622	0.737
Hoxa3 M00532_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxa3_2783	0.622	0.737
Hoxd3 M03287_2.00	Mus musculus	NNTAATKRNN	NNYMATTANN	SELEX Jolma et al.(2013) Hoxd3_1	0.622	0.737
HOXD3 M05101_2.00	Homo sapiens	CTAATTAS	STAATTAG	SELEX Yin et al.(2017) HOXD3_FL_HT-SELEX	0.622	0.737
HOXA3 M10651_2.00	Homo sapiens	SVTWNDDKB	VMHHNWABS	Transfac Matys et al.(2006) V$HOXA3_01	0.622	0.737
HOXD3 M05102_2.00	Homo sapiens	YTAAYGAY	RTCRTTAR	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_1	0.622	0.737
HOXD3 M05103_2.00	Homo sapiens	CTAATKAC	GTMATTAG	SELEX Yin et al.(2017) HOXD3_FL_Methyl-HT-SELEX_2	0.622	0.737
Hoxb3 M00504_2.00	Mus musculus	NTAATKRNN	NNYMATTAN	PBM Berger et al.(2008) Hoxb3_1720	0.622	0.719
HOXB3 M03126_2.00	Homo sapiens	NBTAATKRNN	NNYMATTAVN	SELEX Jolma et al.(2013) HOXB3_1	0.622	0.719
lin-39 M08211_2.00	Caenorhabditis elegans	GATTGATG	CATCAATC	ChIP-seq Contrino et al.(2012) Mw154	0.618	0.754
lin-39 M09582_2.00	Caenorhabditis elegans	DTGATWRATK	MATYWATCAH	Misc Heinz et al.(2010) cElegans.L3-LIN39_modEncode	0.618	0.754
zen M03805_2.00	Drosophila melanogaster	BTAATKRB	VYMATTAV	SELEX Nitta et al.(2015) zen_1	0.617	0.649
zen M06500_2.00	Drosophila melanogaster	YTAATKA	TMATTAR	B1H Mathelier et al.(2014) MA0256.1	0.617	0.649
zen M06276_2.00	Drosophila melanogaster	NBYTAATKA	TMATTARBN	B1H Zhu et al.(2011) Zen_Cell_FBgn0004053	0.617	0.649
zen M06277_2.00	Drosophila melanogaster	AANWTWAWTG	CAWTWAWNTT	B1H Zhu et al.(2011) zen_FlyReg_FBgn0004053	0.617	0.649
zen M06278_2.00	Drosophila melanogaster	NYTAATKA	TMATTARN	B1H Zhu et al.(2011) Zen_SOLEXA_FBgn0004053	0.617	0.649
zen2 M02118_2.00	Drosophila melanogaster	NNTAATKRNN	NNYMATTANN	PBM Weirauch et al.(2014) pTH5479	0.616	0.649
zen2 M03806_2.00	Drosophila melanogaster	BTAATKAS	STMATTAV	SELEX Nitta et al.(2015) zen2_1	0.616	0.649
zen2 M03807_2.00	Drosophila melanogaster	BTAATKWNNVRNNNNYBNNWMATTAV	BTAATKWNNVRNNNNYBNNWMATTAV	SELEX Nitta et al.(2015) zen2_2	0.616	0.649
zen2 M06501_2.00	Drosophila melanogaster	BTAATKA	TMATTAV	B1H Mathelier et al.(2014) MA0257.1	0.616	0.649
zen2 M06279_2.00	Drosophila melanogaster	HNBTAATKA	TMATTAVND	B1H Zhu et al.(2011) Zen2_Cell_FBgn0004054	0.616	0.649
zen2 M06280_2.00	Drosophila melanogaster	NNNTAATKRN	NYMATTANNN	B1H Zhu et al.(2011) zen2_SOLEXA_2_FBgn0004054	0.616	0.649
zen2 M06281_2.00	Drosophila melanogaster	YTAATKR	YMATTAR	B1H Zhu et al.(2011) Zen2_SOLEXA_FBgn0004054	0.616	0.649
HOXC4 M00329_2.00	Homo sapiens	NTAATKRNN	NNYMATTAN	PBM Barrera et al.(2016) HOXC4_R158L	0.613	0.842
Q9GP48_9TURB M02217_2.00	Discocelis tigrina	DTAATTAB	VTAATTAH	PBM Weirauch et al.(2014) pTH6515	0.606	0.596
Q24780_9CNID M02205_2.00	Eleutheria dichotoma	NNYTAATTAMN	NKTAATTARNN	PBM Weirauch et al.(2014) pTH6308	0.601	0.614
Hoxc9 M00470_2.00	Mus musculus	NGTAATWAAN	NTTWATTACN	PBM Berger et al.(2008) Hoxc9_2367	0.599	0.719
Hoxd9 M03282_2.00	Mus musculus	TTTWATKKB	VMMATWAAA	SELEX Jolma et al.(2013) Hoxd9_1	0.599	0.719
Hoxd9 M03283_2.00	Mus musculus	DWTTWATKRY	RYMATWAAWH	SELEX Jolma et al.(2013) Hoxd9_2	0.599	0.719
Hoxd9 M03284_2.00	Mus musculus	DTTWAYGRB	VYCRTWAAH	SELEX Jolma et al.(2013) Hoxd9_3	0.599	0.719
HOXC9 M05331_2.00	Homo sapiens	GTCGTAAAAN	NTTTTACGAC	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_1	0.599	0.719
HOXC9 M05332_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXC9_FL_HT-SELEX_2	0.599	0.719
HOXD9 M05104_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_1	0.599	0.719
HOXD9 M05105_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXD9_eDBD_HT-SELEX_2	0.599	0.719
HOXD9 M05108_2.00	Homo sapiens	RTCGTAAAWN	NWTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_1	0.599	0.719
HOXD9 M05109_2.00	Homo sapiens	NTTTTATKRC	GYMATAAAAN	SELEX Yin et al.(2017) HOXD9_FL_HT-SELEX_2	0.599	0.719
Hoxc9 M08137_2.00	Mus musculus	NWGATTTATDGSH	DSCHATAAATCWN	ChIP-seq Mathelier et al.(2014) MA0485.1	0.599	0.719
HOXC9 M09161_2.00	Homo sapiens	HTTWATKGCH	DGCMATWAAD	Misc Kulakovskiy et al.(2013) HXC9_HUMAN.H11MO.0.C	0.599	0.719
Hoxc9 M09574_2.00	Mus musculus	TGATTTATDGCH	DGCHATAAATCA	Misc Heinz et al.(2010) Ainv15-Hoxc9_GSE21812	0.599	0.719
HOXD9 M10686_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXD9_Q2	0.599	0.719
HOXC9 M05333_2.00	Homo sapiens	RTCGTAAAHN	NDTTTACGAY	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_1	0.599	0.719
HOXC9 M05334_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXC9_FL_Methyl-HT-SELEX_2	0.599	0.719
HOXD9 M05106_2.00	Homo sapiens	NNTTWATKRC	GYMATWAANN	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_1	0.599	0.719
HOXD9 M05107_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_eDBD_Methyl-HT-SELEX_2	0.599	0.719
HOXD9 M05110_2.00	Homo sapiens	RTCGTAAANN	NNTTTACGAY	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_1	0.599	0.719
HOXD9 M05111_2.00	Homo sapiens	NDTTWATKRC	GYMATWAAHN	SELEX Yin et al.(2017) HOXD9_FL_Methyl-HT-SELEX_2	0.599	0.719
Hoxb9 M00410_2.00	Mus musculus	NTTWAYDDNN	NNHHRTWAAN	PBM Berger et al.(2008) Hoxb9_3413	0.599	0.702
Hoxa9 M00475_2.00	Mus musculus	NNDDBNNN	NNNVHHNN	PBM Berger et al.(2008) Hoxa9_2622	0.599	0.702
HOXA9 M03085_2.00	Homo sapiens	NNDTTWAYGAYN	NRTCRTWAAHNN	SELEX Jolma et al.(2013) HOXA10_1	0.599	0.702
HOXA9 M03086_2.00	Homo sapiens	NDTTWATKRYN	NRYMATWAAHN	SELEX Jolma et al.(2013) HOXA10_2	0.599	0.702
HOXA9 M04932_2.00	Homo sapiens	NNDWWABKRC	GYMVTWWHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_1	0.599	0.702
HOXA9 M04933_2.00	Homo sapiens	NNDTWAYGRB	VYCRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_HT-SELEX_2	0.599	0.702
HOXB9 M05289_2.00	Homo sapiens	RTCRTAAAWN	NWTTTAYGAY	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_1	0.599	0.702
HOXB9 M05290_2.00	Homo sapiens	NTTTWATKRC	GYMATWAAAN	SELEX Yin et al.(2017) HOXB9_eDBD_HT-SELEX_2	0.599	0.702
Hoxa9 M08138_2.00	Mus musculus	TGATTKATKRB	VYMATMAATCA	ChIP-seq Mathelier et al.(2014) MA0594.1	0.599	0.702
HOXA9 M09130_2.00	Homo sapiens	DCATAAAYYRBH	DVYRRTTTATGH	Misc Kulakovskiy et al.(2013) HXA10_HUMAN.H11MO.0.C	0.599	0.702
HOXA9 M09131_2.00	Homo sapiens	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_HUMAN.H11MO.0.B	0.599	0.702
Hoxa9 M09203_2.00	Mus musculus	HHATAAATCAH	DTGATTTATDD	Misc Kulakovskiy et al.(2013) HXA9_MOUSE.H11MO.0.B	0.599	0.702
Hoxa9 M09575_2.00	Mus musculus	WGATTKATDRBY	RVYHATMAATCW	Misc Heinz et al.(2010) HSC-Hoxa9_GSE33509	0.599	0.702
HOXA9 M10642_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA10_Q6	0.599	0.702
HOXA9 M10643_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_04	0.599	0.702
HOXA9 M10644_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5_01	0.599	0.702
HOXA9 M10645_2.00	Homo sapiens	Transfac license required	Transfac license required	Transfac Matys et al.(2006) V$HOXA9_Q5	0.599	0.702
HOXB9 M05291_2.00	Homo sapiens	GTCGTAAAHB	VDTTTACGAC	SELEX Yin et al.(2017) HOXB9_eDBD_Methyl-HT-SELEX	0.599	0.702
HOXA9 M04934_2.00	Homo sapiens	NNDTWAYKRC	GYMRTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_1	0.599	0.702
HOXA9 M04935_2.00	Homo sapiens	NNDTWACGAY	RTCGTWAHNN	SELEX Yin et al.(2017) HOXA9_FL_Methyl-HT-SELEX_2	0.599	0.702
For this family, TFs with SR scores > 0.599* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSOPRP00000009533	Homeodomain	130	186	KRGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKK

Links
Other Homeodomain family TFs
Other *Ochotona princeps* TFs

2047 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
28883.m000751	Ricinus communis	28883.m000751	I
29676.m001636	Ricinus communis	29676.m001636	I
29780.m001324	Ricinus communis	29780.m001324	I
29807.m000474	Ricinus communis	29807.m000474	I
AC234520.1_FG003	Zea mays	AC234520.1_FG003	I
Al_scaffold_0001_2706	Arabidopsis lyrata	Al_scaffold_0001_2706	I
AMTR_s00033p00241280	Amborella trichopoda	AMTR_s00033p00241280	I
AMTR_s00093p00110710	Amborella trichopoda	AMTR_s00093p00110710	I
AMTR_s00122p00127250	Amborella trichopoda	AMTR_s00122p00127250	I
Aquca_001_00694	Aquilegia coerulea	Aquca_001_00694	I
Aquca_002_01118	Aquilegia coerulea	Aquca_002_01118	I
Aquca_010_00298	Aquilegia coerulea	Aquca_010_00298	I
Aquca_026_00236	Aquilegia coerulea	Aquca_026_00236	I
BGIOSGA002879	Oryza indica	BGIOSGA002879	I
BGIOSGA013620	Oryza indica	BGIOSGA013620	I
BGIOSGA025055	Oryza indica	BGIOSGA025055	I
BGIOSGA037689	Oryza indica	BGIOSGA037689	I
Bo09513s010	Brassica oleracea	Bo09513s010	I
Bo1g005280	Brassica oleracea	Bo1g005280	I
Bo2g061130	Brassica oleracea	Bo2g061130	I
Bo2g137000	Brassica oleracea	Bo2g137000	I
Bo3g153770	Brassica oleracea	Bo3g153770	I
Bo4g053920	Brassica oleracea	Bo4g053920	I
Bo5g015170	Brassica oleracea	Bo5g015170	I
Bo6g018370	Brassica oleracea	Bo6g018370	I
Bo6g107160	Brassica oleracea	Bo6g107160	I
Bo7g052870	Brassica oleracea	Bo7g052870	I
Bo7g081380	Brassica oleracea	Bo7g081380	I
Bo7g082060	Brassica oleracea	Bo7g082060	I
Bo7g118260	Brassica oleracea	Bo7g118260	I
Bo8g065380	Brassica oleracea	Bo8g065380	I
Bo9g075880	Brassica oleracea	Bo9g075880	I
Bostr.0556s0172	Boechera stricta	Bostr.0556s0172	I
Bostr.0556s0249	Boechera stricta	Bostr.0556s0249	I
Bostr.12659s0399	Boechera stricta	Bostr.12659s0399	I
Bostr.13671s0116	Boechera stricta	Bostr.13671s0116	I
Bostr.26675s0216	Boechera stricta	Bostr.26675s0216	I
Bostr.26959s0022	Boechera stricta	Bostr.26959s0022	I
Bostr.7867s1551	Boechera stricta	Bostr.7867s1551	I
Bra004330	Brassica rapa	Bra004330	I
Bra010581	Brassica rapa	Bra010581	I
Bra011720	Brassica rapa	Bra011720	I
Bra012471	Brassica rapa	Bra012471	I
Bra016734	Brassica rapa	Bra016734	I
Bra017349	Brassica rapa	Bra017349	I
Bra018794	Brassica rapa	Bra018794	I
Bra019824	Brassica rapa	Bra019824	I
Bra025115	Brassica rapa	Bra025115	I
Bra025161	Brassica rapa	Bra025161	I
Bra026548	Brassica rapa	Bra026548	I
Bra038360	Brassica rapa	Bra038360	I
Bra040662	Brassica rapa	Bra040662	I
BRADI1G07630	Brachypodium distachyon	BRADI1G07630	I
BRADI1G58830	Brachypodium distachyon	BRADI1G58830	I
BRADI2G04810	Brachypodium distachyon	BRADI2G04810	I
BRADI3G10730	Brachypodium distachyon	BRADI3G10730	I
BRADI4G03160	Brachypodium distachyon	BRADI4G03160	I
Cagra.0167s0004	Capsella grandiflora	Cagra.0167s0004	I
Cagra.0613s0015	Capsella grandiflora	Cagra.0613s0015	I
Cagra.3392s0001	Capsella grandiflora	Cagra.3392s0001	I
Cagra.3501s0169	Capsella grandiflora	Cagra.3501s0169	I
Cagra.3534s0002	Capsella grandiflora	Cagra.3534s0002	I
Cagra.3545s0007	Capsella grandiflora	Cagra.3545s0007	I
Cagra.4909s0021	Capsella grandiflora	Cagra.4909s0021	I
Carubv10004940m.g	Capsella rubella	Carubv10004940m.g	I
Carubv10009492m.g	Capsella rubella	Carubv10009492m.g	I
Carubv10009677m.g	Capsella rubella	Carubv10009677m.g	I
Carubv10011925m.g	Capsella rubella	Carubv10011925m.g	I
Carubv10017308m.g	Capsella rubella	Carubv10017308m.g	I
Carubv10018983m.g	Capsella rubella	Carubv10018983m.g	I
Carubv10020552m.g	Capsella rubella	Carubv10020552m.g	I
cassava11434.m1	Manihot esculenta	cassava11434.m1	I
cassava11925.valid.m1	Manihot esculenta	cassava11925.valid.m1	I
cassava11986.valid.m1	Manihot esculenta	cassava11986.valid.m1	I
cassava20352.m1	Manihot esculenta	cassava20352.m1	I
cassava24190.valid.m1	Manihot esculenta	cassava24190.valid.m1	I
cassava29454.valid.m1	Manihot esculenta	cassava29454.valid.m1	I
cassava29869.valid.m1	Manihot esculenta	cassava29869.valid.m1	I
cassava43327.valid.m1	Manihot esculenta	cassava43327.valid.m1	I
Ca_02122	Cicer arietinum	Ca_02122	I
Ca_06422	Cicer arietinum	Ca_06422	I
Ca_06627	Cicer arietinum	Ca_06627	I
Ca_08434	Cicer arietinum	Ca_08434	I
chr2.CM1731.80.nc	Lotus japonicus	chr2.CM1731.80.nc	I
chr2.LjT16G06.130.nd	Lotus japonicus	chr2.LjT16G06.130.nd	I
chr5.CM0095.150.nc	Lotus japonicus	chr5.CM0095.150.nc	I
Ciclev10008096m.g	Citrus clementina	Ciclev10008096m.g	I
Ciclev10028556m.g	Citrus clementina	Ciclev10028556m.g	I
Ciclev10031793m.g	Citrus clementina	Ciclev10031793m.g	I
Cla001846	Citrullus lanatus	Cla001846	I
Cla008104	Citrullus lanatus	Cla008104	I
Cla012503	Citrullus lanatus	Cla012503	I
Cla016244	Citrullus lanatus	Cla016244	I
Cla017007	Citrullus lanatus	Cla017007	I
Cla020676	Citrullus lanatus	Cla020676	I
Cucsa.082250	Cucumis sativus	Cucsa.082250	I
Cucsa.102260	Cucumis sativus	Cucsa.102260	I
Cucsa.110080	Cucumis sativus	Cucsa.110080	I
Cucsa.116140	Cucumis sativus	Cucsa.116140	I
Cucsa.220080	Cucumis sativus	Cucsa.220080	I
Cucsa.283860	Cucumis sativus	Cucsa.283860	I
Cucsa.365440	Cucumis sativus	Cucsa.365440	I
EFM	Arabidopsis thaliana	AT2G03500	D
estExt_fgenesh1_pg.C_240109	Physcomitrella patens	estExt_fgenesh1_pg.C_240109	I
Eucgr.C04155	Eucalyptus grandis	Eucgr.C04155	I
Eucgr.G01503	Eucalyptus grandis	Eucgr.G01503	I
Eucgr.G02343	Eucalyptus grandis	Eucgr.G02343	I
Eucgr.H01993	Eucalyptus grandis	Eucgr.H01993	I
Eucgr.I01178	Eucalyptus grandis	Eucgr.I01178	I
evm.TU.supercontig_1.213	Carica papaya	evm.TU.supercontig_1.213	I
evm.TU.supercontig_127.55	Carica papaya	evm.TU.supercontig_127.55	I
evm.TU.supercontig_6.397	Carica papaya	evm.TU.supercontig_6.397	I
evm.TU.supercontig_62.51	Carica papaya	evm.TU.supercontig_62.51	I
F775_03006	Aegilops tauschii	F775_03006	I
F775_07581	Aegilops tauschii	F775_07581	I
F775_09486	Aegilops tauschii	F775_09486	I
F775_13221	Aegilops tauschii	F775_13221	I
F775_15336	Aegilops tauschii	F775_15336	I
fgenesh1_pg.scaffold_166000054	Physcomitrella patens	fgenesh1_pg.scaffold_166000054	I
fgenesh1_pm.C_scaffold_5000265	Arabidopsis lyrata	fgenesh1_pm.C_scaffold_5000265	I
fgenesh2_kg.1__4045__AT1G49560.1	Arabidopsis lyrata	fgenesh2_kg.1__4045__AT1G49560.1	I
fgenesh2_kg.2__1124__AT1G68670.1	Arabidopsis lyrata	fgenesh2_kg.2__1124__AT1G68670.1	I
fgenesh2_kg.7__369__AT4G37180.2	Arabidopsis lyrata	fgenesh2_kg.7__369__AT4G37180.2	I
gene24094-v1.0-hybrid	Fragaria vesca	gene24094-v1.0-hybrid	I
gene30953-v1.0-hybrid	Fragaria vesca	gene30953-v1.0-hybrid	I
gene31899-v1.0-hybrid	Fragaria vesca	gene31899-v1.0-hybrid	I
GLYMA01G21900	Glycine max	GLYMA01G21900	I
GLYMA01G39040	Glycine max	GLYMA01G39040	I
GLYMA02G10940	Glycine max	GLYMA02G10940	I
GLYMA04G21680	Glycine max	GLYMA04G21680	I
GLYMA05G08150	Glycine max	GLYMA05G08150	I
GLYMA05G09690	Glycine max	GLYMA05G09690	I
GLYMA06G23902	Glycine max	GLYMA06G23902	I
GLYMA07G29490	Glycine max	GLYMA07G29490	I
GLYMA07G33130	Glycine max	GLYMA07G33130	I
GLYMA10G34780	Glycine max	GLYMA10G34780	I
GLYMA11G06230	Glycine max	GLYMA11G06230	I
GLYMA17G12720	Glycine max	GLYMA17G12720	I
GLYMA17G20520	Glycine max	GLYMA17G20520	I
GLYMA20G01260	Glycine max	GLYMA20G01260	I
GLYMA20G32770	Glycine max	GLYMA20G32770	I
Gorai.001G002800	Gossypium raimondii	Gorai.001G002800	I
Gorai.003G021300	Gossypium raimondii	Gorai.003G021300	I
Gorai.007G053100	Gossypium raimondii	Gorai.007G053100	I
Gorai.008G026300	Gossypium raimondii	Gorai.008G026300	I
Gorai.008G073300	Gossypium raimondii	Gorai.008G073300	I
Gorai.008G185500	Gossypium raimondii	Gorai.008G185500	I
Gorai.009G022100	Gossypium raimondii	Gorai.009G022100	I
Gorai.010G067300	Gossypium raimondii	Gorai.010G067300	I
Gorai.012G150500	Gossypium raimondii	Gorai.012G150500	I
Gorai.013G040600	Gossypium raimondii	Gorai.013G040600	I
Gorai.013G080200	Gossypium raimondii	Gorai.013G080200	I
GRMZM2G016370	Zea mays	GRMZM2G016370	I
GRMZM2G100176	Zea mays	GRMZM2G100176	I
GRMZM2G124540	Zea mays	GRMZM2G124540	I
GRMZM2G159119	Zea mays	GRMZM2G159119	I
GRMZM2G171468	Zea mays	GRMZM2G171468	I
GRMZM2G173882	Zea mays	GRMZM2G173882	I
GRMZM2G348238	Zea mays	GRMZM2G348238	I
GSMUA_Achr10G08270_001	Musa acuminata	GSMUA_Achr10G08270_001	I
GSMUA_Achr10G19700_001	Musa acuminata	GSMUA_Achr10G19700_001	I
GSMUA_Achr10G27180_001	Musa acuminata	GSMUA_Achr10G27180_001	I
GSMUA_Achr10G28540_001	Musa acuminata	GSMUA_Achr10G28540_001	I
GSMUA_Achr11G13410_001	Musa acuminata	GSMUA_Achr11G13410_001	I
GSMUA_Achr2G13380_001	Musa acuminata	GSMUA_Achr2G13380_001	I
GSMUA_Achr3G21090_001	Musa acuminata	GSMUA_Achr3G21090_001	I
GSMUA_Achr4G03680_001	Musa acuminata	GSMUA_Achr4G03680_001	I
GSMUA_Achr4G23210_001	Musa acuminata	GSMUA_Achr4G23210_001	I
GSMUA_Achr4G28210_001	Musa acuminata	GSMUA_Achr4G28210_001	I
GSMUA_Achr6G00650_001	Musa acuminata	GSMUA_Achr6G00650_001	I
GSMUA_Achr6G05330_001	Musa acuminata	GSMUA_Achr6G05330_001	I
GSMUA_Achr6G09870_001	Musa acuminata	GSMUA_Achr6G09870_001	I
GSMUA_Achr6G34680_001	Musa acuminata	GSMUA_Achr6G34680_001	I
GSMUA_Achr7G00660_001	Musa acuminata	GSMUA_Achr7G00660_001	I
GSMUA_Achr8G18270_001	Musa acuminata	GSMUA_Achr8G18270_001	I
GSMUA_Achr9G09630_001	Musa acuminata	GSMUA_Achr9G09630_001	I
GSMUA_Achr9G26570_001	Musa acuminata	GSMUA_Achr9G26570_001	I
HHO1	Arabidopsis thaliana	AT3G25790	I
HHO2	Arabidopsis thaliana	AT1G68670	D
HHO3	Arabidopsis thaliana	AT1G25550	D
HHO5	Arabidopsis thaliana	AT4G37180	D
HHO6	Arabidopsis thaliana	AT1G49560	D
HRS1	Arabidopsis thaliana	AT1G13300	D
HRS1	Arabidopsis lyrata	scaffold_101490.1	I
LjSGA_025851.1	Lotus japonicus	LjSGA_025851.1	I
LPERR01G04660	Leersia perrieri	LPERR01G04660	I
LPERR02G11880	Leersia perrieri	LPERR02G11880	I
LPERR03G29610	Leersia perrieri	LPERR03G29610	I
LPERR07G01210	Leersia perrieri	LPERR07G01210	I
LPERR12G14470	Leersia perrieri	LPERR12G14470	I
Lus10009334.g	Linum usitatissimum	Lus10009334.g	I
Lus10012056.g	Linum usitatissimum	Lus10012056.g	I
Lus10019452.g	Linum usitatissimum	Lus10019452.g	I
Lus10019639.g	Linum usitatissimum	Lus10019639.g	I
Lus10020995.g	Linum usitatissimum	Lus10020995.g	I
Lus10021699.g	Linum usitatissimum	Lus10021699.g	I
Lus10034280.g	Linum usitatissimum	Lus10034280.g	I
Lus10035043.g	Linum usitatissimum	Lus10035043.g	I
Lus10041485.g	Linum usitatissimum	Lus10041485.g	I
Lus10043304.g	Linum usitatissimum	Lus10043304.g	I
MDP0000128135	Malus domestica	MDP0000128135	I
MDP0000200243	Malus domestica	MDP0000200243	I
MDP0000202657	Malus domestica	MDP0000202657	I
MDP0000231315	Malus domestica	MDP0000231315	I
MDP0000265555	Malus domestica	MDP0000265555	I
MDP0000504079	Malus domestica	MDP0000504079	I
MDP0000703817	Malus domestica	MDP0000703817	I
mgf006847m	Mimulus guttatus	mgf006847m	I
mgf007637m	Mimulus guttatus	mgf007637m	I
mgf010394m	Mimulus guttatus	mgf010394m	I
mgf011229m	Mimulus guttatus	mgf011229m	I
mgf013042m	Mimulus guttatus	mgf013042m	I
mgf013442m	Mimulus guttatus	mgf013442m	I
mgf023459m	Mimulus guttatus	mgf023459m	I
MLOC_61146	Hordeum vulgare	MLOC_61146	I
MLOC_67453	Hordeum vulgare	MLOC_67453	I
MLOC_72007	Hordeum vulgare	MLOC_72007	I
MTR_1g093080	Medicago truncatula	MTR_1g093080	I
MTR_4g086835	Medicago truncatula	MTR_4g086835	I
MTR_4g113140	Medicago truncatula	MTR_4g113140	I
MTR_5g017980	Medicago truncatula	MTR_5g017980	I
MTR_5g054300	Medicago truncatula	MTR_5g054300	I
NIGT1	Oryza sativa	OS02G0325600	D
OB01G14760	Oryza brachyantha	OB01G14760	I
OB02G22950	Oryza brachyantha	OB02G22950	I
OB03G42230	Oryza brachyantha	OB03G42230	I
OB07G11040	Oryza brachyantha	OB07G11040	I
OBART02G14690	Oryza barthii	OBART02G14690	I
OBART03G35220	Oryza barthii	OBART03G35220	I
OBART07G01330	Oryza barthii	OBART07G01330	I
OBART12G17240	Oryza barthii	OBART12G17240	I
OGLUM01G05410	Oryza glumaepatula	OGLUM01G05410	I
OGLUM02G14610	Oryza glumaepatula	OGLUM02G14610	I
OGLUM03G34980	Oryza glumaepatula	OGLUM03G34980	I
OGLUM07G01230	Oryza glumaepatula	OGLUM07G01230	I
OGLUM12G18880	Oryza glumaepatula	OGLUM12G18880	I
OLONG_003720	Oryza longistaminata	OLONG_003720	I
OLONG_018015	Oryza longistaminata	OLONG_018015	I
OLONG_018167	Oryza longistaminata	OLONG_018167	I
OLONG_019215	Oryza longistaminata	OLONG_019215	I
OLONG_023667	Oryza longistaminata	OLONG_023667	I
OMERI01G04960	Oryza meridionalis	OMERI01G04960	I
OMERI02G14870	Oryza meridionalis	OMERI02G14870	I
OMERI03G32430	Oryza meridionalis	OMERI03G32430	I
OMERI07G00590	Oryza meridionalis	OMERI07G00590	I
ONIVA01G05610	Oryza nivara	ONIVA01G05610	I
ONIVA02G15910	Oryza nivara	ONIVA02G15910	I
ONIVA03G36730	Oryza nivara	ONIVA03G36730	I
ONIVA07G00160	Oryza nivara	ONIVA07G00160	I
ONIVA12G16020	Oryza nivara	ONIVA12G16020	I
OPUNC01G04800	Oryza punctata	OPUNC01G04800	I
OPUNC02G13150	Oryza punctata	OPUNC02G13150	I
OPUNC03G32250	Oryza punctata	OPUNC03G32250	I
OPUNC07G01230	Oryza punctata	OPUNC07G01230	I
OPUNC12G15670	Oryza punctata	OPUNC12G15670	I
orange1.1g011048m.g	Citrus sinensis	orange1.1g011048m.g	I
orange1.1g015403m.g	Citrus sinensis	orange1.1g015403m.g	I
orange1.1g016585m.g	Citrus sinensis	orange1.1g016585m.g	I
ORGLA01G0045900	Oryza glaberrima	ORGLA01G0045900	I
ORGLA01G0412400	Oryza glaberrima	ORGLA01G0412400	I
ORGLA02G0127400	Oryza glaberrima	ORGLA02G0127400	I
ORGLA03G0322500	Oryza glaberrima	ORGLA03G0322500	I
ORGLA07G0012100	Oryza glaberrima	ORGLA07G0012100	I
ORGLA10G0167800	Oryza glaberrima	ORGLA10G0167800	I
ORGLA12G0148200	Oryza glaberrima	ORGLA12G0148200	I
ORUFI01G05240	Oryza rufipogon	ORUFI01G05240	I
ORUFI02G14900	Oryza rufipogon	ORUFI02G14900	I
ORUFI03G36670	Oryza rufipogon	ORUFI03G36670	I
ORUFI07G01280	Oryza rufipogon	ORUFI07G01280	I
ORUFI12G19230	Oryza rufipogon	ORUFI12G19230	I
OS01G0176700	Oryza sativa	OS01G0176700	I
OS03G0764600	Oryza sativa	OS03G0764600	I
OS07G0119300	Oryza sativa	OS07G0119300	I
OS12G0586300	Oryza sativa	OS12G0586300	I
Pavir.Aa02952	Panicum virgatum	Pavir.Aa02952	I
Pavir.Ab00626	Panicum virgatum	Pavir.Ab00626	I
Pavir.Ba02240	Panicum virgatum	Pavir.Ba02240	I
Pavir.Ca02525	Panicum virgatum	Pavir.Ca02525	I
Pavir.Cb00438	Panicum virgatum	Pavir.Cb00438	I
Pavir.Eb00363	Panicum virgatum	Pavir.Eb00363	I
Pavir.Ia00346	Panicum virgatum	Pavir.Ia00346	I
Pavir.J08752	Panicum virgatum	Pavir.J08752	I
Pavir.J13382	Panicum virgatum	Pavir.J13382	I
Pavir.J16844	Panicum virgatum	Pavir.J16844	I
Pavir.J18103	Panicum virgatum	Pavir.J18103	I
PGSC0003DMG400000828	Solanum tuberosum	PGSC0003DMG400000828	I
PGSC0003DMG400010067	Solanum tuberosum	PGSC0003DMG400010067	I
PGSC0003DMG400025801	Solanum tuberosum	PGSC0003DMG400025801	I
PGSC0003DMG400030389	Solanum tuberosum	PGSC0003DMG400030389	I
PK04145.1	Cannabis sativa	PK04145.1	I
PK14402.1	Cannabis sativa	PK14402.1	D
PK19779.1	Cannabis sativa	PK19779.1	D
PK20621.1	Cannabis sativa	PK20621.1	I
Pm021479	Prunus mume	Pm021479	I
Pm026452	Prunus mume	Pm026452	I
Pm027466	Prunus mume	Pm027466	I
Pm029019	Prunus mume	Pm029019	I
POPTR_0004s15220	Populus trichocarpa	POPTR_0004s15220	I
POPTR_0005s14120	Populus trichocarpa	POPTR_0005s14120	I
POPTR_0006s16000	Populus trichocarpa	POPTR_0006s16000	I
POPTR_0007s11470	Populus trichocarpa	POPTR_0007s11470	I
POPTR_0008s11630	Populus trichocarpa	POPTR_0008s11630	I
POPTR_0009s10980	Populus trichocarpa	POPTR_0009s10980	I
POPTR_0010s13900	Populus trichocarpa	POPTR_0010s13900	I
POPTR_0018s06410	Populus trichocarpa	POPTR_0018s06410	I
PRUPE_ppa006812mg	Prunus persica	PRUPE_ppa006812mg	I
PRUPE_ppa006879mg	Prunus persica	PRUPE_ppa006879mg	I
PRUPE_ppa007222mg	Prunus persica	PRUPE_ppa007222mg	I
PRUPE_ppa016044mg	Prunus persica	PRUPE_ppa016044mg	I
SapurV1A.0079s0410	Salix purpurea	SapurV1A.0079s0410	I
SapurV1A.0090s0480	Salix purpurea	SapurV1A.0090s0480	I
SapurV1A.0246s0200	Salix purpurea	SapurV1A.0246s0200	I
SapurV1A.0428s0080	Salix purpurea	SapurV1A.0428s0080	I
SapurV1A.0512s0010	Salix purpurea	SapurV1A.0512s0010	I
SapurV1A.0641s0120	Salix purpurea	SapurV1A.0641s0120	I
SapurV1A.1001s0050	Salix purpurea	SapurV1A.1001s0050	I
SapurV1A.1020s0030	Salix purpurea	SapurV1A.1020s0030	I
SapurV1A.1984s0010	Salix purpurea	SapurV1A.1984s0010	I
Sb01g007130	Sorghum bicolor	Sb01g007130	I
Sb02g001600	Sorghum bicolor	Sb02g001600	I
Sb03g004090	Sorghum bicolor	Sb03g004090	I
Sb08g003180	Sorghum bicolor	Sb08g003180	I
Sb08g019720	Sorghum bicolor	Sb08g019720	I
scaffold_500333.1	Arabidopsis lyrata	scaffold_500333.1	I
SELMODRAFT_402040	Selaginella moellendorffii	SELMODRAFT_402040	I
SELMODRAFT_423260	Selaginella moellendorffii	SELMODRAFT_423260	I
SELMODRAFT_66160	Selaginella moellendorffii	SELMODRAFT_66160	I
Si001230m.g	Setaria italica	Si001230m.g	I
Si019945m.g	Setaria italica	Si019945m.g	I
Si022287m.g	Setaria italica	Si022287m.g	I
Si030286m.g	Setaria italica	Si030286m.g	I
Si036412m.g	Setaria italica	Si036412m.g	I
Solyc01g108300.2	Solanum lycopersicum	Solyc01g108300.2	I
Solyc02g090400.2	Solanum lycopersicum	Solyc02g090400.2	I
Solyc05g009720.2	Solanum lycopersicum	Solyc05g009720.2	I
Solyc12g006800.1	Solanum lycopersicum	Solyc12g006800.1	I
TCM_000558	Theobroma cacao	TCM_000558	I
TCM_006998	Theobroma cacao	TCM_006998	I
TCM_011857	Theobroma cacao	TCM_011857	I
TCM_019009	Theobroma cacao	TCM_019009	I
TCM_037970	Theobroma cacao	TCM_037970	I
Thhalv10004257m.g	Eutrema salsugineum	Thhalv10004257m.g	I
Thhalv10004475m.g	Eutrema salsugineum	Thhalv10004475m.g	I
Thhalv10008054m.g	Eutrema salsugineum	Thhalv10008054m.g	I
Thhalv10008115m.g	Eutrema salsugineum	Thhalv10008115m.g	I
Thhalv10011605m.g	Eutrema salsugineum	Thhalv10011605m.g	I
Thhalv10018737m.g	Eutrema salsugineum	Thhalv10018737m.g	I
Thhalv10025593m.g	Eutrema salsugineum	Thhalv10025593m.g	I
TRAES3BF056900070CFD_g	Triticum aestivum	TRAES3BF056900070CFD_g	I
Traes_2AL_92939B028	Triticum aestivum	Traes_2AL_92939B028	I
Traes_2BL_EED456A17	Triticum aestivum	Traes_2BL_EED456A17	I
Traes_2BS_10A8CAB27	Triticum aestivum	Traes_2BS_10A8CAB27	I
Traes_2DL_64EAA3388	Triticum aestivum	Traes_2DL_64EAA3388	I
Traes_5AL_D98C7CE92	Triticum aestivum	Traes_5AL_D98C7CE92	I
Traes_5BL_1AE458202	Triticum aestivum	Traes_5BL_1AE458202	I
Traes_5BS_C9EA93E10	Triticum aestivum	Traes_5BS_C9EA93E10	I
Traes_5DL_B2F166A31	Triticum aestivum	Traes_5DL_B2F166A31	I
Traes_5DS_13C2391DC	Triticum aestivum	Traes_5DS_13C2391DC	I
TRIUR3_20779	Triticum urartu	TRIUR3_20779	I
VIT_01s0011g03110	Vitis vinifera	VIT_01s0011g03110	I
VIT_03s0063g01060	Vitis vinifera	VIT_03s0063g01060	I
VIT_07s0197g00060	Vitis vinifera	VIT_07s0197g00060	I
VIT_11s0016g04600	Vitis vinifera	VIT_11s0016g04600	I

HOXA7 (Ochotona princeps) Homeodomain

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

2047 Related TFs

HOXA7 **(Ochotona princeps)
Homeodomain**